3OUN

Crystal structure of the FhaA FHA domain complexed with the intracellular domain of Rv3910


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.71 Å
  • R-Value Free: 0.240 
  • R-Value Work: 0.184 
  • R-Value Observed: 0.187 

wwPDB Validation   3D Report Full Report


This is version 1.2 of the entry. See complete history


Literature

A phosphorylated pseudokinase complex controls cell wall synthesis in mycobacteria

Gee, C.L.Papavinasasundaram, K.G.Blair, S.R.Baer, C.E.Falick, A.M.King, D.S.Griffin, J.E.Venghatakrishnan, H.Zukauskas, A.Wei, J.R.Dhiman, R.K.Crick, D.C.Rubin, E.J.Sassetti, C.M.Alber, T.

(2012) Sci Signal 5: ra7-ra7

  • DOI: https://doi.org/10.1126/scisignal.2002525
  • Primary Citation of Related Structures:  
    3OTV, 3OUK, 3OUN, 3UQC

  • PubMed Abstract: 

    Prokaryotic cell wall biosynthesis is coordinated with cell growth and division, but the mechanisms regulating this dynamic process remain obscure. Here, we describe a phosphorylation-dependent regulatory complex that controls peptidoglycan (PG) biosynthesis in Mycobacterium tuberculosis. We found that PknB, a PG-responsive Ser-Thr protein kinase (STPK), initiates complex assembly by phosphorylating a kinase-like domain in the essential PG biosynthetic protein, MviN. This domain was structurally diverged from active kinases and did not mediate phosphotransfer. Threonine phosphorylation of the pseudokinase domain recruited the FhaA protein through its forkhead-associated (FHA) domain. The crystal structure of this phosphorylated pseudokinase-FHA domain complex revealed the basis of FHA domain recognition, which included unexpected contacts distal to the phosphorylated threonine. Conditional degradation of these proteins in mycobacteria demonstrated that MviN was essential for growth and PG biosynthesis and that FhaA regulated these processes at the cell poles and septum. Controlling this spatially localized PG regulatory complex is only one of several cellular roles ascribed to PknB, suggesting that the capacity to coordinate signaling across multiple processes is an important feature conserved between eukaryotic and prokaryotic STPK networks.


  • Organizational Affiliation

    Department of Molecular and Cell Biology, QB3 Institute, University of California, Berkeley, Berkeley, CA 94720-3220, USA.


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Putative uncharacterized protein TB39.8157Mycobacterium tuberculosis H37RvMutation(s): 0 
Gene Names: Rv0020cTB39.8
UniProt
Find proteins for P71590 (Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
Explore P71590 
Go to UniProtKB:  P71590
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP71590
Sequence Annotations
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  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 2
MoleculeChains Sequence LengthOrganismDetailsImage
PROBABLE CONSERVED TRANSMEMBRANE PROTEIN288Mycobacterium tuberculosis H37RvMutation(s): 0 
Gene Names: MT4029Rv3910
UniProt
Find proteins for P9WJK3 (Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
Explore P9WJK3 
Go to UniProtKB:  P9WJK3
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP9WJK3
Sequence Annotations
Expand
  • Reference Sequence
Small Molecules
Ligands 1 Unique
IDChains Name / Formula / InChI Key2D Diagram3D Interactions
MN
Query on MN

Download Ideal Coordinates CCD File 
C [auth B]MANGANESE (II) ION
Mn
WAEMQWOKJMHJLA-UHFFFAOYSA-N
Modified Residues  1 Unique
IDChains TypeFormula2D DiagramParent
TPO
Query on TPO
B
L-PEPTIDE LINKINGC4 H10 N O6 PTHR
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.71 Å
  • R-Value Free: 0.240 
  • R-Value Work: 0.184 
  • R-Value Observed: 0.187 
  • Space Group: P 31 2 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 80.709α = 90
b = 80.709β = 90
c = 139.83γ = 120
Software Package:
Software NamePurpose
ELVESrefinement
PHENIXmodel building
PHENIXrefinement
HKL-2000data reduction
HKL-2000data scaling
PHENIXphasing

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2012-02-08
    Type: Initial release
  • Version 1.1: 2017-11-08
    Changes: Advisory, Refinement description
  • Version 1.2: 2023-11-01
    Changes: Advisory, Data collection, Database references, Derived calculations, Refinement description