3OI8

The crystal structure of functionally unknown conserved protein domain from Neisseria meningitidis MC58


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.989 Å
  • R-Value Free: 0.232 
  • R-Value Work: 0.182 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

The crystal structure of functionally unknown conserved protein domain from Neisseria meningitidis MC58

Zhang, R.Tan, K.Li, H.Cobb, G.Joachimiak, A.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Uncharacterized protein
A, B
156Neisseria meningitidis serogroup B (strain MC58)Mutation(s): 0 
Find proteins for Q9K0P8 (Neisseria meningitidis serogroup B (strain MC58))
Go to UniProtKB:  Q9K0P8
Small Molecules
Ligands 3 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
GOL
Query on GOL

Download SDF File 
Download CCD File 
A
GLYCEROL
GLYCERIN; PROPANE-1,2,3-TRIOL
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
 Ligand Interaction
ADN
Query on ADN

Download SDF File 
Download CCD File 
A, B
ADENOSINE
C10 H13 N5 O4
OIRDTQYFTABQOQ-KQYNXXCUSA-N
 Ligand Interaction
PEG
Query on PEG

Download SDF File 
Download CCD File 
A
DI(HYDROXYETHYL)ETHER
C4 H10 O3
MTHSVFCYNBDYFN-UHFFFAOYSA-N
 Ligand Interaction
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
MSE
Query on MSE
A, B
L-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.989 Å
  • R-Value Free: 0.232 
  • R-Value Work: 0.182 
  • Space Group: P 1 21 1
Unit Cell:
Length (Å)Angle (°)
a = 53.640α = 90.00
b = 52.156β = 112.67
c = 64.010γ = 90.00
Software Package:
Software NamePurpose
PHENIXrefinement
HKL-3000data reduction
DMphasing
SHELXDphasing
SBC-Collectdata collection
HKL-3000phasing
WARPmodel building
DMmodel building
ARPmodel building
HKL-3000data scaling
MLPHAREphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2010-09-22
    Type: Initial release
  • Version 1.1: 2011-07-13
    Type: Version format compliance