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Download EndnoteCrystal structure of yciE protein from E. coli CFT073, a member of ferritine-like superfamily of diiron-containing four-helix-bundle proteins
Nocek, B., Bigelow, L., Bearden, J., Joachimiak, A.To be published.
3OGH
Crystal structure of yciE protein from E. coli CFT073, a member of ferritine-like superfamily of diiron-containing four-helix-bundle proteins
- DOI: 10.2210/pdb3OGH/pdb
- Classification: Structural Genomics Unknown function
- Organism(s): Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
- Expression System: Escherichia coli BL21(DE3)
- Deposited: 2010-08-16 Released: 2010-09-15
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.65 Å
- R-Value Free: 0.213
- R-Value Work: 0.166
wwPDB Validation 3D Report Full Report
This is version 1.1 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by: Sequence | Structure
Entity ID: 1 | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details |
| Protein yciE | B, A | 171 | Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) | Mutation(s): 0 Gene Names: yciE |
Find proteins for A0A0H2V857 (Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)) Go to UniProtKB: A0A0H2V857 | ||||
Small Molecules
| Ligands 3 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| CL Query on CL | B | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M |  | Ligand Interaction | |
| MG Query on MG | A, B | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N |  | Ligand Interaction | |
| FE Query on FE | A, B | FE (III) ION Fe VTLYFUHAOXGGBS-UHFFFAOYSA-N |  | Ligand Interaction | |
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| MSE Query on MSE | A, B | L-PEPTIDE LINKING | C5 H11 N O2 Se |  | MET |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.65 Å
- R-Value Free: 0.213
- R-Value Work: 0.166
- Space Group: P 1 21 1
Unit Cell:
| Length (Å) | Angle (°) |
|---|---|
| a = 30.148 | α = 90.00 |
| b = 90.295 | β = 103.51 |
| c = 58.132 | γ = 90.00 |
| Software Name | Purpose |
|---|---|
| HKL-3000 | data scaling |
| HKL-3000 | data reduction |
| SBC-Collect | data collection |
| SHELX | model building |
| ARP/wARP | model building |
| REFMAC | refinement |
| SHELX | phasing |
| HKL-3000 | phasing |
Entry History
Deposition Data
- Deposited Date: 2010-08-16
- Released Date: 2010-09-15
- Deposition Author(s): Nocek, B., Bigelow, L., Bearden, J., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
