Crystal structure of yciE protein from E. coli CFT073, a member of ferritine-like superfamily of diiron-containing four-helix-bundle proteins
Nocek, B., Bigelow, L., Bearden, J., Joachimiak, A.To be published.
Experimental Data Snapshot
wwPDB Validation 3D Report Full Report
Find similar proteins by: Sequence  |  Structure
Entity ID: 1 | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details |
Protein yciE | B, A | 171 | Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) | Mutation(s): 0  Gene Names: yciE |
Find proteins for A0A0H2V857 (Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)) Go to UniProtKB:  A0A0H2V857 |
Ligands 3 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
CL Query on CL | B | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M | ![]() |  Ligand Interaction | |
MG Query on MG | A, B | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N | ![]() |  Ligand Interaction | |
FE Query on FE | A, B | FE (III) ION Fe VTLYFUHAOXGGBS-UHFFFAOYSA-N | ![]() |  Ligand Interaction |
Modified Residues  1 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Type | Formula | 2D Diagram | Parent |
MSE Query on MSE | A, B | L-PEPTIDE LINKING | C5 H11 N O2 Se | ![]() | MET |
Length (Å) | Angle (°) |
---|---|
a = 30.148 | α = 90.00 |
b = 90.295 | β = 103.51 |
c = 58.132 | γ = 90.00 |
Software Name | Purpose |
---|---|
HKL-3000 | data scaling |
HKL-3000 | data reduction |
SBC-Collect | data collection |
SHELX | model building |
ARP/wARP | model building |
REFMAC | refinement |
SHELX | phasing |
HKL-3000 | phasing |