3OFE

Structured Domain of Drosophila melanogaster Boca p41 2 2 Crystal form

• PDB DOI: https://doi.org/10.2210/pdb3OFE/pdb

• Classification: CHAPERONE
• Organism(s): Drosophila melanogaster
• Expression System: Escherichia coli BL21(DE3)
• Mutation(s): No 


• Deposited: 2010-08-14 Released: 2011-03-02 
• Deposition Author(s): Collins, M.N., Hendrickson, W.A.

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 2.29 Å
• R-Value Free: 0.228 
• R-Value Work: 0.189 
• R-Value Observed: 0.191 

Literature

Structural Characterization of the Boca/Mesd Maturation Factors for LDL-Receptor-Type beta-Propeller Domains

Collins, M.N., Hendrickson, W.A.

(2011) Structure 

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors and generated by PISA (software)

Biological Assembly 2  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 2 assigned by authors and generated by PISA (software)

Macromolecule Content

• Total Structure Weight: 21.45 kDa 
• Atom Count: 1,421 
• Modelled Residue Count: 159 
• Deposited Residue Count: 182 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
LDLR chaperone boca	A, B	91	Drosophila melanogaster	Mutation(s): 0  Gene Names: boca, CG30498
UniProt
Find proteins for Q8T9B6 (Drosophila melanogaster) Explore Q8T9B6  Go to UniProtKB:  Q8T9B6

Small Molecules

Modified Residues  1 Unique
ID	Chains	Type	Formula	2D Diagram	Parent
MSE	A, B	L-PEPTIDE LINKING	C5 H11 N O2 Se		MET

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 2.29 Å
• R-Value Free: 0.228 
• R-Value Work: 0.189 
• R-Value Observed: 0.191 
• Space Group: P 4₁ 2 2

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 34.106	α = 90
b = 34.106	β = 90
c = 311.238	γ = 90

Software Package:

Software Name	Purpose
DENZO	data reduction
SCALEPACK	data scaling
SOLVE	phasing
RESOLVE	phasing
PHENIX	refinement
PDB_EXTRACT	data extraction
CBASS	data collection

Structure Validation

Entry History 

Deposition Data

• Released Date: 2011-03-02 
Deposition Author(s): Collins, M.N., Hendrickson, W.A.

Revision History  

• Version 1.0: 2011-03-02
  Type: Initial release
  
• Version 1.1: 2011-07-13
  Changes: Version format compliance