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Download EndnoteCRYSTAL STRUCTURE OF putative dioxygenase from Bacillus subtilis subsp. subtilis str. 168
Malashkevich, V.N., Toro, R., Seidel, R., Garrett, S., Foti, R., Almo, S.C.To be published.
3OAJ
CRYSTAL STRUCTURE OF putative dioxygenase from Bacillus subtilis subsp. subtilis str. 168
- DOI: 10.2210/pdb3OAJ/pdb
- Classification: structural genomics unknown function
- Organism(s): Bacillus subtilis (strain 168)
- Expression System: Escherichia coli BL21(DE3)
- Deposited: 2010-08-05 Released: 2010-08-18
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.4 Å
- R-Value Free: 0.225
- R-Value Work: 0.180
wwPDB Validation 3D Report Full Report
This is version 1.1 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by: Sequence | Structure
Entity ID: 1 | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details |
| Putative ring-cleaving dioxygenase mhqO | A, B | 335 | Bacillus subtilis (strain 168) | Mutation(s): 0 Gene Names: mhqO (ydfO) EC: 1.13.11.- |
Find proteins for P96693 (Bacillus subtilis (strain 168)) Go to UniProtKB: P96693 | ||||
Small Molecules
| Ligands 2 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| ZN Query on ZN | A, B | ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N |  | Ligand Interaction | |
| SO4 Query on SO4 | A, B | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L |  | Ligand Interaction | |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.4 Å
- R-Value Free: 0.225
- R-Value Work: 0.180
- Space Group: P 1 21 1
Unit Cell:
| Length (Å) | Angle (°) |
|---|---|
| a = 50.215 | α = 90.00 |
| b = 86.181 | β = 91.65 |
| c = 72.968 | γ = 90.00 |
| Software Name | Purpose |
|---|---|
| PDB_EXTRACT | data extraction |
| REFMAC | refinement |
| PHASER | phasing |
| HKL-2000 | data reduction |
| CBASS | data collection |
| SCALEPACK | data scaling |
Entry History
Deposition Data
- Deposited Date: 2010-08-05
- Released Date: 2010-08-18
- Deposition Author(s): Malashkevich, V.N., Toro, R., Seidel, R., Garrett, S., Foti, R., Almo, S.C., New York Structural Genomics Research Consortium (NYSGRC)
