3O7T | pdb_00003o7t

Crystal Structure of Cyclophilin A from Moniliophthora perniciosa

• PDB DOI: https://doi.org/10.2210/pdb3O7T/pdb

• Classification: ISOMERASE
• Organism(s): Moniliophthora perniciosa
• Expression System: Escherichia coli BL21(DE3)
• Mutation(s): No 


• Deposited: 2010-07-31 Released: 2011-08-10 
• Deposition Author(s): Monzani, P.S., Pereira, H.M., Gramacho, K.P., Meirelles, F.V., Oliva, G., Cascardo, J.C.M.

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 1.85 Å
• R-Value Free: 
  0.206 (Depositor), 0.204 (DCC) 
• R-Value Work: 
  0.166 (Depositor), 0.163 (DCC) 
• R-Value Observed: 
  0.168 (Depositor) 

Literature

Crystal Structures of apo-cyclophilin and bounded cyclosporine A from Moniliophthora perniciosa

Monzani, P.S., Pereira, H.M., Gramacho, K.P., Meirelles, F.V., Oliva, G., Cascardo, J.C.M.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors and generated by PISA (software)

Macromolecule Content 

• Total Structure Weight: 17.92 kDa 
• Atom Count: 1,449 
• Modeled Residue Count: 164 
• Deposited Residue Count: 164 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Cyclophilin A	A	164	Moniliophthora perniciosa	Mutation(s): 0  EC: 5.2.1.8
UniProt
Find proteins for E3P6K5 (Moniliophthora perniciosa) Explore E3P6K5  Go to UniProtKB:  E3P6K5

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 1.85 Å
• R-Value Free:  0.206 (Depositor), 0.204 (DCC) 
• R-Value Work:  0.166 (Depositor), 0.163 (DCC) 
• R-Value Observed: 0.168 (Depositor) 

Space Group: I 2 2 2

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 37.854	α = 90
b = 98.206	β = 90
c = 111.682	γ = 90

Software Package:

Software Name	Purpose
SCALA	data scaling
PHASER	phasing
PHENIX	refinement
PDB_EXTRACT	data extraction
MAR345dtb	data collection
MOSFLM	data reduction

Structure Validation

Entry History 

Deposition Data

• Released Date: 2011-08-10 
Deposition Author(s): Monzani, P.S., Pereira, H.M., Gramacho, K.P., Meirelles, F.V., Oliva, G., Cascardo, J.C.M.

Revision History  

• Version 1.0: 2011-08-10
  Type: Initial release
  
• Version 1.1: 2024-02-21
  Changes: Data collection, Database references