3NMW

Crystal structure of armadillo repeats domain of APC


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.6 Å
  • R-Value Free: 0.201 
  • R-Value Work: 0.168 

wwPDB Validation 3D Report Full Report


This is version 1.3 of the entry. See complete history

Literature

Structural basis for the recognition of Asef by adenomatous polyposis coli

Zhang, Z.Chen, L.Gao, L.Lin, K.Zhu, L.Lu, Y.Shi, X.Gao, Y.Zhou, J.Xu, P.Zhang, J.Wu, G.

(2012) Cell Res. 22: 372-386


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
APC variant protein
A, B
354Homo sapiensMutation(s): 0 
Gene Names: APC (DP2.5)
Find proteins for P25054 (Homo sapiens)
Go to Gene View: APC
Go to UniProtKB:  P25054
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
SO4
Query on SO4

Download SDF File 
Download CCD File 
A, B
SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
 Ligand Interaction
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
MSE
Query on MSE
A, B
L-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.6 Å
  • R-Value Free: 0.201 
  • R-Value Work: 0.168 
  • Space Group: P 1
Unit Cell:
Length (Å)Angle (°)
a = 51.389α = 90.31
b = 52.682β = 89.95
c = 63.451γ = 95.16
Software Package:
Software NamePurpose
SOLVEphasing
RESOLVEphasing
SCALEPACKdata scaling
PDB_EXTRACTdata extraction
REFMACrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2011-07-06
    Type: Initial release
  • Version 1.1: 2011-07-13
    Type: Version format compliance
  • Version 1.2: 2016-12-21
    Type: Structure summary
  • Version 1.3: 2017-03-15
    Type: Database references