3MZY

The Crystal Structure of the RNA polymerase sigma-H factor from Fusobacterium nucleatum to 2.5A


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.269 
  • R-Value Work: 0.234 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

The Crystal Structure of the RNA polymerase sigma-H factor from Fusobacterium nucleatum to 2.5A

Stein, A.J.Chhor, G.Clancy, S.Joachimiak, A.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
RNA polymerase sigma-H factor
A
164Fusobacterium nucleatum subsp. nucleatum (strain ATCC 25586 / CIP 101130 / JCM 8532 / LMG 13131)Mutation(s): 0 
Find proteins for Q8RIQ2 (Fusobacterium nucleatum subsp. nucleatum (strain ATCC 25586 / CIP 101130 / JCM 8532 / LMG 13131))
Go to UniProtKB:  Q8RIQ2
Small Molecules
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
MSE
Query on MSE
A
L-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.269 
  • R-Value Work: 0.234 
  • Space Group: P 65 2 2
Unit Cell:
Length (Å)Angle (°)
a = 71.761α = 90.00
b = 71.761β = 90.00
c = 153.623γ = 120.00
Software Package:
Software NamePurpose
MLPHAREphasing
DENZOdata reduction
HKL-3000data reduction
SCALEPACKdata scaling
Cootmodel building
REFMACrefinement
PDB_EXTRACTdata extraction
ARP/wARPmodel building
HKL-3000data scaling
DMphasing
SBC-Collectdata collection
SHELXphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2010-06-02
    Type: Initial release
  • Version 1.1: 2011-07-13
    Type: Version format compliance
  • Version 1.2: 2017-11-08
    Type: Refinement description