3MWI

The complex crystal Structure of Urokianse and 5-nitro-1H-indole-2-amidine


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.03 Å
  • R-Value Free: 0.297 
  • R-Value Work: 0.215 
  • R-Value Observed: 0.219 

wwPDB Validation   3D Report Full Report


This is version 1.2 of the entry. See complete history


Literature

The complex crystal Structure of Urokianse and 5-nitro-1H-indole-2-amidine

Jiang, L.G.Yu, H.Y.Yuan, C.Huang, Z.X.Huang, M.D.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
Urokinase-type plasminogen activatorA [auth U]246Homo sapiensMutation(s): 1 
Gene Names: HumanPLAU
EC: 3.4.21.73
Find proteins for P00749 (Homo sapiens)
Explore P00749 
Go to UniProtKB:  P00749
NIH Common Fund Data Resources
PHAROS:  P00749
Protein Feature View
Expand
  • Reference Sequence
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
B25
Query on B25

Download Ideal Coordinates CCD File 
B [auth U]5-nitro-1H-indole-2-carboximidamide
C9 H8 N4 O2
ZFLOQYGDSBVASK-UHFFFAOYSA-N
 Ligand Interaction
SO4
Query on SO4

Download Ideal Coordinates CCD File 
C [auth U], D [auth U]SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.03 Å
  • R-Value Free: 0.297 
  • R-Value Work: 0.215 
  • R-Value Observed: 0.219 
  • Space Group: H 3
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 121.465α = 90
b = 121.465β = 90
c = 43.097γ = 120
Software Package:
Software NamePurpose
PROTEUM PLUSdata collection
AMoREphasing
REFMACrefinement
SAINTdata reduction
SCALAdata scaling

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2011-06-01
    Type: Initial release
  • Version 1.1: 2011-07-13
    Changes: Version format compliance
  • Version 1.2: 2019-12-25
    Changes: Data collection, Database references