3MJU

Crystal structure determination of pigeon (columba livia) haemoglobin at 3.5 angstrom resolution


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.5 Å
  • R-Value Free: 0.312 
  • R-Value Work: 0.236 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

Crystal structure determination of pigeon (columba livia) haemoglobin at 3.5 angstrom resolution

Sathya Moorthy, P.Balasubramanian, M.Thenmozhi, M.Ponnuswamy, M.N.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Hemoglobin subunit alpha-A
A
141Columba liviaMutation(s): 0 
Gene Names: HBAA
Find proteins for P21871 (Columba livia)
Go to UniProtKB:  P21871
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
Hemoglobin subunit beta
B
146Columba liviaMutation(s): 0 
Gene Names: HBB
Find proteins for P11342 (Columba livia)
Go to Gene View: HBB
Go to UniProtKB:  P11342
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
HEM
Query on HEM

Download SDF File 
Download CCD File 
A, B
PROTOPORPHYRIN IX CONTAINING FE
HEME
C34 H32 Fe N4 O4
KABFMIBPWCXCRK-RGGAHWMASA-L
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.5 Å
  • R-Value Free: 0.312 
  • R-Value Work: 0.236 
  • Space Group: P 42 21 2
Unit Cell:
Length (Å)Angle (°)
a = 82.061α = 90.00
b = 82.061β = 90.00
c = 106.095γ = 90.00
Software Package:
Software NamePurpose
PHASERphasing
REFMACrefinement
SCALEPACKdata scaling
MAR345dtbdata collection
AUTOMARdata reduction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2010-12-08
    Type: Initial release
  • Version 1.1: 2011-07-13
    Type: Version format compliance
  • Version 1.2: 2018-06-20
    Type: Data collection, Database references, Structure summary