3MI4

Bovine trypsin at 0.8 A resolution, non-restrained refinement


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 0.8 Å
  • R-Value Free: 0.112 
  • R-Value Work: 0.105 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

Bovine trypsin at 0.8 A and role of restraints at ultra-high resolution

Brzuszkiewicz, A.Dauter, M.Dauter, Z.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Cationic trypsin
A
223Bos taurusEC: 3.4.21.4
Find proteins for P00760 (Bos taurus)
Go to UniProtKB:  P00760
Small Molecules
Ligands 4 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
SO4
Query on SO4

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Download CCD File 
A
SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
 Ligand Interaction
GOL
Query on GOL

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Download CCD File 
A
GLYCEROL
GLYCERIN; PROPANE-1,2,3-TRIOL
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
 Ligand Interaction
CA
Query on CA

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Download CCD File 
A
CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
 Ligand Interaction
BEN
Query on BEN

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Download CCD File 
A
BENZAMIDINE
C7 H8 N2
PXXJHWLDUBFPOL-UHFFFAOYSA-N
 Ligand Interaction
External Ligand Annotations 
IDBinding Affinity (Sequence Identity %)
BDNKi: 31 - 39000 nM (100) BINDINGDB
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 0.8 Å
  • R-Value Free: 0.112 
  • R-Value Work: 0.105 
  • Space Group: P 21 21 21
Unit Cell:
Length (Å)Angle (°)
a = 54.220α = 90.00
b = 58.530β = 90.00
c = 66.450γ = 90.00
Software Package:
Software NamePurpose
ACORNphasing
SHELXL-97refinement
HKL-2000data reduction
HKL-2000data scaling

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2010-04-28
    Type: Initial release
  • Version 1.1: 2011-07-13
    Type: Version format compliance