3MES

Crystal structure of choline kinase from Cryptosporidium parvum Iowa II, cgd3_2030


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.35 Å
  • R-Value Free: 0.291 
  • R-Value Work: 0.245 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

Crystal structure of choline kinase from Cryptosporidium parvum Iowa II, cgd3_2030

Qiu, W.Wernimont, A.Hills, T.Lew, J.Artz, J.D.Xiao, T.Allali-Hassani, A.Vedadi, M.Kozieradzki, I.Cossar, D.Bountra, C.Weigelt, J.Arrowsmith, C.H.Edwards, A.M.Hui, R.Ma, D.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Choline kinase
A, B
424Cryptosporidium parvum (strain Iowa II)Mutation(s): 0 
Find proteins for Q5CUP2 (Cryptosporidium parvum (strain Iowa II))
Go to UniProtKB:  Q5CUP2
Small Molecules
Ligands 5 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
ADP
Query on ADP

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Download CCD File 
A, B
ADENOSINE-5'-DIPHOSPHATE
C10 H15 N5 O10 P2
XTWYTFMLZFPYCI-KQYNXXCUSA-N
 Ligand Interaction
GOL
Query on GOL

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Download CCD File 
A
GLYCEROL
GLYCERIN; PROPANE-1,2,3-TRIOL
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
 Ligand Interaction
DME
Query on DME

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Download CCD File 
A, B
DECAMETHONIUM ION
C16 H38 N2
MTCUAOILFDZKCO-UHFFFAOYSA-N
 Ligand Interaction
MG
Query on MG

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Download CCD File 
A, B
MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
 Ligand Interaction
PT3
Query on PT3

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Download CCD File 
A, B
N-PROPYL-TARTRAMIC ACID
C7 H13 N O5
LNEZKQHJUNIZIS-RFZPGFLSSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.35 Å
  • R-Value Free: 0.291 
  • R-Value Work: 0.245 
  • Space Group: C 1 2 1
Unit Cell:
Length (Å)Angle (°)
a = 170.091α = 90.00
b = 67.957β = 116.54
c = 92.109γ = 90.00
Software Package:
Software NamePurpose
CrystalCleardata collection
XDSdata reduction
XDSdata scaling
REFMACrefinement
BALBESphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Revision History 

  • Version 1.0: 2010-04-07
    Type: Initial release
  • Version 1.1: 2011-07-13
    Type: Version format compliance