3M05

The crystal structure of a functionally unknown protein PEPE_1480 from Pediococcus pentosaceus ATCC 25745


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.145 Å
  • R-Value Free: 0.247 
  • R-Value Work: 0.196 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

The crystal structure of a functionally unknown protein PEPE_1480 from Pediococcus pentosaceus ATCC 25745

Tan, K.Bigelow, L.Bearden, J.Joachimiak, A.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
uncharacterized protein PEPE_1480
A, B, C
114Pediococcus pentosaceus (strain ATCC 25745 / CCUG 21536 / LMG 10740 / 183-1w)Mutation(s): 0 
Find proteins for Q03E61 (Pediococcus pentosaceus (strain ATCC 25745 / CCUG 21536 / LMG 10740 / 183-1w))
Go to UniProtKB:  Q03E61
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
SO4
Query on SO4

Download SDF File 
Download CCD File 
A, B, C
SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
 Ligand Interaction
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
MSE
Query on MSE
A, B, C
L-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.145 Å
  • R-Value Free: 0.247 
  • R-Value Work: 0.196 
  • Space Group: P 43 21 2
Unit Cell:
Length (Å)Angle (°)
a = 119.774α = 90.00
b = 119.774β = 90.00
c = 119.349γ = 90.00
Software Package:
Software NamePurpose
SHELXDphasing
HKL-3000data reduction
SBC-Collectdata collection
RESOLVEmodel building
HKL-3000phasing
DMmodel building
DMphasing
HKL-3000data scaling
MLPHAREphasing
PHENIXrefinement
RESOLVEphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2010-03-16
    Type: Initial release
  • Version 1.1: 2011-07-13
    Type: Version format compliance
  • Version 1.2: 2014-04-09
    Type: Data collection