3LV9

Crystal structure of CBS domain of a putative transporter from Clostridium difficile 630


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.262 
  • R-Value Work: 0.201 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

Crystal structure of CBS domain of a putative transporter from Clostridium difficile 630

Nocek, B.Tesar, C.Cobb, G.Joachimiak, A.MCSG

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Putative transporter
A
148Peptoclostridium difficile (strain 630)Mutation(s): 0 
Find proteins for Q183U2 (Peptoclostridium difficile (strain 630))
Go to UniProtKB:  Q183U2
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
PO4
Query on PO4

Download SDF File 
Download CCD File 
A
PHOSPHATE ION
O4 P
NBIIXXVUZAFLBC-UHFFFAOYSA-K
 Ligand Interaction
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
MSE
Query on MSE
A
L-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.262 
  • R-Value Work: 0.201 
  • Space Group: P 32 2 1
Unit Cell:
Length (Å)Angle (°)
a = 43.641α = 90.00
b = 43.641β = 90.00
c = 127.763γ = 120.00
Software Package:
Software NamePurpose
HKL-3000data reduction
DMphasing
SHELXphasing
MLPHAREphasing
ARP/wARPmodel building
DMmodel building
REFMACrefinement
Cootmodel building
SBC-Collectdata collection
HKL-3000phasing
SHELXmodel building
HKL-3000data scaling

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2010-03-09
    Type: Initial release
  • Version 1.1: 2011-07-13
    Type: Advisory, Version format compliance
  • Version 1.2: 2017-11-08
    Type: Refinement description