3LUY

Putative chorismate mutase from Bifidobacterium adolescentis


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2 Å
  • R-Value Free: 0.225 
  • R-Value Work: 0.192 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

X-ray crystal structure of putative chorismate mutase from Bifidobacterium adolescentis.

Osipiuk, J.Bigelow, L.Bearden, J.Joachimiak, A.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Probable chorismate mutase
A
329Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a)Mutation(s): 0 
Gene Names: pheA
Find proteins for A1A2B5 (Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a))
Go to UniProtKB:  A1A2B5
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
PPY
Query on PPY

Download SDF File 
Download CCD File 
A
3-PHENYLPYRUVIC ACID
C9 H8 O3
BTNMPGBKDVTSJY-UHFFFAOYSA-N
 Ligand Interaction
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
MSE
Query on MSE
A
L-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2 Å
  • R-Value Free: 0.225 
  • R-Value Work: 0.192 
  • Space Group: P 21 21 2
Unit Cell:
Length (Å)Angle (°)
a = 99.954α = 90.00
b = 59.198β = 90.00
c = 63.172γ = 90.00
Software Package:
Software NamePurpose
DMphasing
DENZOdata reduction
SOLVEphasing
HKL-3000phasing
HKL-3000data scaling
HKL-3000data reduction
SCALEPACKdata scaling
PDB_EXTRACTdata extraction
MLPHAREphasing
REFMACrefinement
SHELXDphasing
SBC-Collectdata collection
RESOLVEphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2010-03-09
    Type: Initial release
  • Version 1.1: 2011-07-13
    Type: Advisory, Refinement description, Version format compliance
  • Version 1.2: 2017-11-08
    Type: Refinement description