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Download EndnoteMetabotropic Glutamate receptor mGluR5 complexed with glutamate
Dobrovetsky, E., Khutoreskaya, G., Seitova, A., Cossar, D., Edwards, A.M., Arrowsmith, C.H., Bountra, C., Weigelt, J., Bochkarev, A.To be published.
3LMK
Ligand Binding Domain of Metabotropoc glutamate receptor mGluR5 complexed with glutamate
- DOI: 10.2210/pdb3LMK/pdb
- Classification: SIGNALING PROTEIN
- Organism(s): Homo sapiens
- Expression System: unidentified baculovirus
- Mutation(s): 1
- Deposited: 2010-01-30 Released: 2010-02-16
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.44 Å
- R-Value Free: 0.281
- R-Value Work: 0.232
wwPDB Validation 3D Report Full Report
This is version 1.2 of the entry. See complete history.
Literature
To be published.
Macromolecules
Small Molecules
| Ligands 3 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| MG Query on MG | A, B | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N |  | Ligand Interaction | |
| GLU Query on GLU | A, B | GLUTAMIC ACID C5 H9 N O4 WHUUTDBJXJRKMK-VKHMYHEASA-N |  | Ligand Interaction | |
| NAG Query on NAG | A, B | N-ACETYL-D-GLUCOSAMINE C8 H15 N O6 OVRNDRQMDRJTHS-FMDGEEDCSA-N |  | Ligand Interaction | |
| External Ligand Annotations | |
|---|---|
| ID | Binding Affinity (Sequence Identity %) |
| GLU | Ki: 1160 nM PDBBIND |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.44 Å
- R-Value Free: 0.281
- R-Value Work: 0.232
- Space Group: P 21 21 21
Unit Cell:
| Length (Å) | Angle (°) |
|---|---|
| a = 71.875 | α = 90.00 |
| b = 98.346 | β = 90.00 |
| c = 155.239 | γ = 90.00 |
| Software Name | Purpose |
|---|---|
| PDB_EXTRACT | data extraction |
| StructureStudio | data collection |
| SCALEPACK | data scaling |
| DENZO | data reduction |
| MOLREP | phasing |
| REFMAC | refinement |
| HKL-2000 | data scaling |
Entry History
Deposition Data
- Deposited Date: 2010-01-30
- Released Date: 2010-02-16
- Deposition Author(s): Dobrovetsky, E., Khutoreskaya, G., Seitova, A., Cossar, D., Edwards, A.M., Arrowsmith, C.H., Bountra, C., Weigelt, J., Bochkarev, A., Structural Genomics Consortium (SGC)
