Biological Assembly 1  

 3D View: Structure | Electron Density | Ligand Interaction

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Global Symmetry: Cyclic - C2  (3D View)
Global Stoichiometry: Homo 2-mer - A2 

Biological assembly 1 assigned by authors and generated by PISA (software)

Macromolecule Content

• Total Structure Weight: 22525.52 
• Atom Count: 1565 
• Residue Count: 186 
• Unique protein chains: 1

3LHR

Crystal structure of the SCAN domain from Human ZNF24

• DOI: 10.2210/pdb3LHR/pdb

• Classification: TRANSCRIPTION REGULATOR
• Organism(s): Homo sapiens
• Expression System: Escherichia coli


• Deposited: 2010-01-22 Released: 2010-05-12 
• Deposition Author(s): Volkman, B.F., Peterson, F.C., Bingman, C.A., Phillips Jr., G.N., Center for Eukaryotic Structural Genomics (CESG)

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 1.9 Å
• R-Value Free: 0.243 
• R-Value Work: 0.182 

Literature

Crystal structure of the SCAN domain from Human ZNF24

Volkman, B.F., Peterson, F.C., Bingman, C.A., Phillips Jr., G.N.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details
Zinc finger protein 24	A, B	93	Homo sapiens	Mutation(s): 0  Gene Names: ZNF24 (KOX17, ZNF191, ZSCAN3)
Find proteins for P17028 (Homo sapiens) Go to Gene View: ZNF24 Go to UniProtKB:  P17028

Small Molecules

Ligands 4 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram & Interactions
CL	A	CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M
MG	A	MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N
EMC	A	ETHYL MERCURY ION C2 H5 Hg MJOUBOKSWBMNGQ-UHFFFAOYSA-N
PEG	B	DI(HYDROXYETHYL)ETHER C4 H10 O3 MTHSVFCYNBDYFN-UHFFFAOYSA-N

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 1.9 Å
• R-Value Free: 0.243 
• R-Value Work: 0.182 
• Space Group: P 2₁ 2₁ 2₁

Unit Cell:

Length (Å)	Angle (°)
a = 43.055	α = 90.00
b = 50.029	β = 90.00
c = 91.301	γ = 90.00

Software Package:

Software Name	Purpose
DENZO	data reduction
DM	phasing
PDB_EXTRACT	data extraction
SHARP	phasing
SCALEPACK	data scaling
REFMAC	refinement
HKL-2000	data collection

Structure Validation

Entry History 

Deposition Data

• Deposited Date: 2010-01-22 
• Released Date: 2010-05-12 
• Deposition Author(s): Volkman, B.F., Peterson, F.C., Bingman, C.A., Phillips Jr., G.N., Center for Eukaryotic Structural Genomics (CESG)

Revision History 

• Version 1.0: 2010-05-12
  Type: Initial release
• Version 1.1: 2011-07-13
  Type: Version format compliance
• Version 1.2: 2013-01-30
  Type: Database references, Structure summary
• Version 1.3: 2017-11-01
  Type: Refinement description