3LEQ

The Crystal Structure of the Roadblock/LC7 domain from Streptomyces avermitillis to 1.85A


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.85 Å
  • R-Value Free: 0.236 
  • R-Value Work: 0.216 

wwPDB Validation 3D Report Full Report


This is version 1.3 of the entry. See complete history

Literature

The Crystal Structure of the Roadblock/LC7 domain from Streptomyces avermitillis to 1.85A

Stein, A.J.Xu, X.Cui, H.Ng, J.Edwards, A.Savchenko, A.Joachimiak, A.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
uncharacterized protein cvnB5
A
126Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NBRC 14893 / NCIMB 12804 / NRRL 8165 / MA-4680)Mutation(s): 0 
Gene Names: cvnB5
Find proteins for Q82L23 (Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NBRC 14893 / NCIMB 12804 / NRRL 8165 / MA-4680))
Go to UniProtKB:  Q82L23
Small Molecules
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
MSE
Query on MSE
A
L-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.85 Å
  • R-Value Free: 0.236 
  • R-Value Work: 0.216 
  • Space Group: C 1 2 1
Unit Cell:
Length (Å)Angle (°)
a = 89.466α = 90.00
b = 29.824β = 104.89
c = 40.752γ = 90.00
Software Package:
Software NamePurpose
SHELXphasing
MLPHAREphasing
SCALEPACKdata scaling
Cootmodel building
PDB_EXTRACTdata extraction
ARP/wARPmodel building
HKL-3000data scaling
SBC-Collectdata collection
DMphasing
HKL-3000data reduction
HKL-3000phasing
DENZOdata reduction
REFMACrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2010-02-02
    Type: Initial release
  • Version 1.1: 2011-07-13
    Type: Advisory, Version format compliance
  • Version 1.2: 2012-02-22
    Type: Structure summary
  • Version 1.3: 2017-11-01
    Type: Refinement description