3LDH

A comparison of the structures of apo dogfish m4 lactate dehydrogenase and its ternary complexes


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3 Å

wwPDB Validation 3D Report Full Report


This is version 1.4 of the entry. See complete history

Literature

A comparison of the structures of apo dogfish M4 lactate dehydrogenase and its ternary complexes.

White, J.L.Hackert, M.L.Buehner, M.Adams, M.J.Ford, G.C.Lentz Jr., P.J.Smiley, I.E.Steindel, S.J.Rossmann, M.G.

(1976) J.Mol.Biol. 102: 759-779


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
LACTATE DEHYDROGENASE
A
330Squalus acanthiasGene Names: ldha
EC: 1.1.1.27
Find proteins for P00341 (Squalus acanthias)
Go to UniProtKB:  P00341
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
PYR
Query on PYR

Download SDF File 
Download CCD File 
A
PYRUVIC ACID
C3 H4 O3
LCTONWCANYUPML-UHFFFAOYSA-N
 Ligand Interaction
NAD
Query on NAD

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Download CCD File 
A
NICOTINAMIDE-ADENINE-DINUCLEOTIDE
C21 H27 N7 O14 P2
BAWFJGJZGIEFAR-NNYOXOHSSA-N
 Ligand Interaction
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
ACE
Query on ACE
A
NON-POLYMERC2 H4 O

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Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3 Å
  • Space Group: C 4 21 2
Unit Cell:
Length (Å)Angle (°)
a = 134.500α = 90.00
b = 134.500β = 90.00
c = 85.900γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 1977-04-29
    Type: Initial release
  • Version 1.1: 2008-03-25
    Type: Version format compliance
  • Version 1.2: 2011-07-13
    Type: Version format compliance
  • Version 1.3: 2013-05-01
    Type: Derived calculations
  • Version 1.4: 2017-11-29
    Type: Derived calculations, Other