3L9I

Myosin VI nucleotide-free (mdinsert2) L310G mutant crystal structure


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.235 
  • R-Value Work: 0.185 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

Role of insert i of myosin VI in modulating nucleotide affinity

Pylypenko, O.Song, L.Squires, G.Liu, X.Zong, A.B.Houdusse, A.Sweeney, L.H.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Myosin-VI
A
814Sus scrofaMutation(s): 1 
Gene Names: MYO6
Find proteins for Q29122 (Sus scrofa)
Go to Gene View: MYO6
Go to UniProtKB:  Q29122
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
Calmodulin
C
149Drosophila melanogasterMutation(s): 0 
Gene Names: Cam
Find proteins for P62152 (Drosophila melanogaster)
Go to UniProtKB:  P62152
Small Molecules
Ligands 4 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
PO4
Query on PO4

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A
PHOSPHATE ION
O4 P
NBIIXXVUZAFLBC-UHFFFAOYSA-K
 Ligand Interaction
ACT
Query on ACT

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Download CCD File 
A
ACETATE ION
C2 H3 O2
QTBSBXVTEAMEQO-UHFFFAOYSA-M
 Ligand Interaction
CA
Query on CA

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C
CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
 Ligand Interaction
TBU
Query on TBU

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Download CCD File 
A
TERTIARY-BUTYL ALCOHOL
2-METHYL-2-PROPANOL
C4 H10 O
DKGAVHZHDRPRBM-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.235 
  • R-Value Work: 0.185 
  • Space Group: P 1 21 1
Unit Cell:
Length (Å)Angle (°)
a = 68.540α = 90.00
b = 104.400β = 91.09
c = 90.330γ = 90.00
Software Package:
Software NamePurpose
REFMACrefinement
MOLREPphasing
XSCALEdata scaling
ADSCdata collection
XDSdata reduction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2010-12-08
    Type: Initial release
  • Version 1.1: 2011-07-13
    Type: Version format compliance