3L92

Phosphopantetheine adenylyltransferase from Yersinia pestis complexed with coenzyme A.


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.89 Å
  • R-Value Free: 0.192 
  • R-Value Work: 0.164 

wwPDB Validation 3D Report Full Report


This is version 1.3 of the entry. See complete history

Literature

X-ray crystal structure of phosphopantetheine adenylyltransferase from Yersinia pestis.

Osipiuk, J.Maltseva, N.Makowska-grzyska, M.Kwon, K.Anderson, W.F.Joachimiak, A.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Phosphopantetheine adenylyltransferase
A
162Yersinia pestisGene Names: coaD (kdtB)
EC: 2.7.7.3
Find proteins for Q8ZJN9 (Yersinia pestis)
Go to UniProtKB:  Q8ZJN9
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
COA
Query on COA

Download SDF File 
Download CCD File 
A
COENZYME A
C21 H36 N7 O16 P3 S
RGJOEKWQDUBAIZ-IBOSZNHHSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

Unit Cell:
Length (Å)Angle (°)
a = 114.820α = 90.00
b = 114.820β = 90.00
c = 119.074γ = 120.00
Software Package:
Software NamePurpose
HKL-3000data reduction
REFMACrefinement
PDB_EXTRACTdata extraction
SBC-Collectdata collection
MOLREPphasing
SCALEPACKdata scaling
DENZOdata reduction
HKL-3000phasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2010-01-19
    Type: Initial release
  • Version 1.1: 2011-07-13
    Type: Advisory, Refinement description, Version format compliance
  • Version 1.2: 2014-10-01
    Type: Structure summary
  • Version 1.3: 2017-11-01
    Type: Refinement description