3KFQ

Unreduced cathepsin V in complex with stefin A


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.99 Å
  • R-Value Free: 0.219 
  • R-Value Work: 0.176 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

Unreduced cathepsin V in complex with stefin A

Renko, M.Turk, D.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Cathepsin L2
A, B
221Homo sapiensMutation(s): 2 
Gene Names: CTSV (CATL2, CTSL2, CTSU)
EC: 3.4.22.43
Find proteins for O60911 (Homo sapiens)
Go to Gene View: CTSV
Go to UniProtKB:  O60911
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
Cystatin-A
C, D
98Homo sapiensMutation(s): 0 
Gene Names: CSTA (STF1, STFA)
Find proteins for P01040 (Homo sapiens)
Go to Gene View: CSTA
Go to UniProtKB:  P01040
Small Molecules
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
SCH
Query on SCH
A, B
L-PEPTIDE LINKINGC4 H9 N O2 S2CYS
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.99 Å
  • R-Value Free: 0.219 
  • R-Value Work: 0.176 
  • Space Group: P 21 21 21
Unit Cell:
Length (Å)Angle (°)
a = 59.313α = 90.00
b = 107.290β = 90.00
c = 115.980γ = 90.00
Software Package:
Software NamePurpose
DENZOdata reduction
REFMACrefinement
PDB_EXTRACTdata extraction
SCALEPACKdata scaling
HKL-2000data collection
AMoREphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

  • Deposited Date: 2009-10-27 
  • Released Date: 2010-11-03 
  • Deposition Author(s): Renko, M., Turk, D.

Revision History 

  • Version 1.0: 2010-11-03
    Type: Initial release
  • Version 1.1: 2011-07-13
    Type: Version format compliance
  • Version 1.2: 2017-11-01
    Type: Advisory, Refinement description