Download MendeleyStructural Basis of E2-25K/UBB+1 Interaction for Neurotoxicity of Alzheimer Disease by Proteasome Inhibition
Kang, G.B., Ko, S., Song, S.M., Lee, W., Eom, S.M.To be published.
3K9O
The crystal structure of E2-25K and UBB+1 complex
- PDB DOI: https://doi.org/10.2210/pdb3K9O/pdb
- Classification: LIGASE
- Organism(s): Homo sapiens
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2009-10-16 Released: 2010-09-08
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.80 Å
- R-Value Free: 0.233
- R-Value Work: 0.187
- R-Value Observed: 0.189
wwPDB Validation 3D Report Full Report
This is version 1.1 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Ubiquitin-conjugating enzyme E2 K | A | 201 | Homo sapiens | Mutation(s): 0 Gene Names: UBE2K, HIP2, LIG EC: 6.3.2.19 (PDB Primary Data), 2.3.2.23 (UniProt) |  |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P61086 (Homo sapiens) Explore P61086 Go to UniProtKB: P61086 | |||||
PHAROS: P61086 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P61086 | ||||
Protein Feature ViewExpand | |||||
| |||||
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 2 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Ubiquitin | B | 96 | Homo sapiens | Mutation(s): 0 Gene Names: UBB, UBC |  |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P0CG48 (Homo sapiens) Explore P0CG48 Go to UniProtKB: P0CG48 | |||||
PHAROS: P0CG48 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P0CG48 | ||||
Protein Feature ViewExpand | |||||
| |||||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.80 Å
- R-Value Free: 0.233
- R-Value Work: 0.187
- R-Value Observed: 0.189
- Space Group: C 1 2 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 102.48 | α = 90 |
| b = 50.547 | β = 125.01 |
| c = 71.323 | γ = 90 |
| Software Name | Purpose |
|---|---|
| HKL-2000 | data collection |
| MOLREP | phasing |
| REFMAC | refinement |
| HKL-2000 | data reduction |
| HKL-2000 | data scaling |
Entry History
Deposition Data
- Released Date: 2010-09-08 Deposition Author(s): Kang, G.B., Ko, S., Song, S.M., Lee, W., Eom, S.H.
Revision History (Full details and data files)
- Version 1.0: 2010-09-08
Type: Initial release - Version 1.1: 2011-07-13
Changes: Version format compliance
