3K3S

Crystal structure of altronate hydrolase (fragment 1-84) from Shigella Flexneri.


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.15 Å
  • R-Value Free: 0.213 
  • R-Value Work: 0.174 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

Crystal structure of altronate hydrolase (fragment 1-84) from Shigella Flexneri.

Hou, J.Chruszcz, M.Xu, X.Le, B.Zimmerman, M.D.Savchenko, A.Edwards, A.M.Joachimiak, A.Minor, W.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Altronate hydrolase
A, B, C, D, E, F, G, H
105Shigella flexneriMutation(s): 0 
Gene Names: uxaA
Find proteins for A0A0H2VY20 (Shigella flexneri)
Go to UniProtKB:  A0A0H2VY20
Small Molecules
Ligands 3 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
ACT
Query on ACT

Download SDF File 
Download CCD File 
B, C, E, F, G, H
ACETATE ION
C2 H3 O2
QTBSBXVTEAMEQO-UHFFFAOYSA-M
 Ligand Interaction
CL
Query on CL

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Download CCD File 
B, G, H
CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
 Ligand Interaction
MLA
Query on MLA

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Download CCD File 
A, D
MALONIC ACID
DICARBOXYLIC ACID C3; PROPANEDIOLIC ACID; METHANEDICARBOXYLIC ACID
C3 H4 O4
OFOBLEOULBTSOW-UHFFFAOYSA-N
 Ligand Interaction
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
MSE
Query on MSE
A, B, C, D, E, F, G, H
L-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.15 Å
  • R-Value Free: 0.213 
  • R-Value Work: 0.174 
  • Space Group: P 1 21 1
Unit Cell:
Length (Å)Angle (°)
a = 113.968α = 90.00
b = 40.218β = 104.33
c = 121.001γ = 90.00
Software Package:
Software NamePurpose
HKL-2000data collection
HKL-3000data scaling
RESOLVEmodel building
DMphasing
RESOLVEphasing
MLPHAREphasing
HKL-2000data reduction
REFMACrefinement
DMmodel building
SHELXDphasing
HKL-3000phasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2009-10-27
    Type: Initial release
  • Version 1.1: 2011-07-13
    Type: Advisory, Version format compliance
  • Version 1.2: 2015-04-29
    Type: Non-polymer description