Crystal structure of Iron superoxide dismutase from Anaplasma phagocytophilum
Edwards, T.E., Staker, B.L., Seattle Structural Genomics Center for Infectious Disease (SSGCID)To be published.
Experimental Data Snapshot
Starting Model: experimental
View more details
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Superoxide dismutase | 227 | Anaplasma phagocytophilum str. HZ | Mutation(s): 0  Gene Names: sodB, APH_0371 EC: 1.15.1.1 | ||
UniProt | |||||
Find proteins for Q2GKX4 (Anaplasma phagocytophilum (strain HZ)) Explore Q2GKX4  Go to UniProtKB:  Q2GKX4 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q2GKX4 | ||||
Sequence AnnotationsExpand | |||||
|
Ligands 2 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
FE Query on FE | E [auth A], G [auth B], I [auth C], K [auth D] | FE (III) ION Fe VTLYFUHAOXGGBS-UHFFFAOYSA-N | |||
NA Query on NA | F [auth A], H [auth B], J [auth C], L [auth D] | SODIUM ION Na FKNQFGJONOIPTF-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 45.66 | α = 102.09 |
b = 66.6 | β = 104.83 |
c = 85.44 | γ = 88.58 |
Software Name | Purpose |
---|---|
XSCALE | data scaling |
MOLREP | phasing |
REFMAC | refinement |
PDB_EXTRACT | data extraction |
XDS | data reduction |