3J9W

Cryo-EM structure of the Bacillus subtilis MifM-stalled ribosome complex


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.90 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation   3D Report Full Report


This is version 1.2 of the entry. See complete history


Literature

Structure of the Bacillus subtilis 70S ribosome reveals the basis for species-specific stalling.

Sohmen, D.Chiba, S.Shimokawa-Chiba, N.Innis, C.A.Berninghausen, O.Beckmann, R.Ito, K.Wilson, D.N.

(2015) Nat Commun 6: 6941-6941

  • DOI: 10.1038/ncomms7941
  • Primary Citation of Related Structures:  
    3J9W

  • PubMed Abstract: 
  • Ribosomal stalling is used to regulate gene expression and can occur in a species-specific manner. Stalling during translation of the MifM leader peptide regulates expression of the downstream membrane protein biogenesis factor YidC2 (YqjG) in Bacillus subtilis, but not in Escherichia coli ...

    Ribosomal stalling is used to regulate gene expression and can occur in a species-specific manner. Stalling during translation of the MifM leader peptide regulates expression of the downstream membrane protein biogenesis factor YidC2 (YqjG) in Bacillus subtilis, but not in Escherichia coli. In the absence of structures of Gram-positive bacterial ribosomes, a molecular basis for species-specific stalling has remained unclear. Here we present the structure of a Gram-positive B. subtilis MifM-stalled 70S ribosome at 3.5-3.9 Å, revealing a network of interactions between MifM and the ribosomal tunnel, which stabilize a non-productive conformation of the PTC that prevents aminoacyl-tRNA accommodation and thereby induces translational arrest. Complementary genetic analyses identify a single amino acid within ribosomal protein L22 that dictates the species specificity of the stalling event. Such insights expand our understanding of how the synergism between the ribosome and the nascent chain is utilized to modulate the translatome in a species-specific manner.


    Organizational Affiliation

    1] Gene Center and Department for Biochemistry, University of Munich, Feodor-Lynen-Street 25, Munich 81377, Germany [2] Center for integrated Protein Science Munich (CiPSM), University of Munich, Feodor-Lynen-Street 25, Munich 81377, Germany.



Macromolecules

Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetailsImage
30S ribosomal protein uS2B [auth AB]246Bacillus subtilis subsp. subtilis str. 168Mutation(s): 0 
Gene Names: rpsBBSU16490
Find proteins for P21464 (Bacillus subtilis (strain 168))
Explore P21464 
Go to UniProtKB:  P21464
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 3
MoleculeChainsSequence LengthOrganismDetailsImage
30S ribosomal protein uS3C [auth AC]218Bacillus subtilis subsp. subtilis str. 168Mutation(s): 0 
Gene Names: rpsCBSU01220
Find proteins for P21465 (Bacillus subtilis (strain 168))
Explore P21465 
Go to UniProtKB:  P21465
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 4
MoleculeChainsSequence LengthOrganismDetailsImage
30S ribosomal protein uS4D [auth AD]200Bacillus subtilis subsp. subtilis str. 168Mutation(s): 0 
Gene Names: rpsDBSU29660
Find proteins for P21466 (Bacillus subtilis (strain 168))
Explore P21466 
Go to UniProtKB:  P21466
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 5
MoleculeChainsSequence LengthOrganismDetailsImage
30S ribosomal protein uS5E [auth AE]166Bacillus subtilis subsp. subtilis str. 168Mutation(s): 0 
Gene Names: rpsEspcABSU01330
Find proteins for P21467 (Bacillus subtilis (strain 168))
Explore P21467 
Go to UniProtKB:  P21467
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 6
MoleculeChainsSequence LengthOrganismDetailsImage
30S ribosomal protein bS6F [auth AF]95Bacillus subtilis subsp. subtilis str. 168Mutation(s): 0 
Gene Names: rpsFBSU40910
Find proteins for P21468 (Bacillus subtilis (strain 168))
Explore P21468 
Go to UniProtKB:  P21468
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 7
MoleculeChainsSequence LengthOrganismDetailsImage
30S ribosomal protein uS7G [auth AG]156Bacillus subtilis subsp. subtilis str. 168Mutation(s): 0 
Gene Names: rpsGBSU01110
Find proteins for P21469 (Bacillus subtilis (strain 168))
Explore P21469 
Go to UniProtKB:  P21469
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 8
MoleculeChainsSequence LengthOrganismDetailsImage
30S ribosomal protein uS8H [auth AH]132Bacillus subtilis subsp. subtilis str. 168Mutation(s): 0 
Gene Names: rpsHBSU01300
Find proteins for P12879 (Bacillus subtilis (strain 168))
Explore P12879 
Go to UniProtKB:  P12879
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 9
MoleculeChainsSequence LengthOrganismDetailsImage
30S ribosomal protein uS9I [auth AI]130Bacillus subtilis subsp. subtilis str. 168Mutation(s): 0 
Gene Names: rpsIBSU01500
Find proteins for P21470 (Bacillus subtilis (strain 168))
Explore P21470 
Go to UniProtKB:  P21470
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 10
MoleculeChainsSequence LengthOrganismDetailsImage
30S ribosomal protein uS10J [auth AJ]102Bacillus subtilis subsp. subtilis str. 168Mutation(s): 0 
Gene Names: rpsJtetABSU01150
Find proteins for P21471 (Bacillus subtilis (strain 168))
Explore P21471 
Go to UniProtKB:  P21471
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 11
MoleculeChainsSequence LengthOrganismDetailsImage
30S ribosomal protein uS11K [auth AK]131Bacillus subtilis subsp. subtilis str. 168Mutation(s): 0 
Gene Names: rpsKBSU01420
Find proteins for P04969 (Bacillus subtilis (strain 168))
Explore P04969 
Go to UniProtKB:  P04969
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 12
MoleculeChainsSequence LengthOrganismDetailsImage
30S ribosomal protein uS12L [auth AL]138Bacillus subtilis subsp. subtilis str. 168Mutation(s): 0 
Gene Names: rpsLfunstrABSU01100
Find proteins for P21472 (Bacillus subtilis (strain 168))
Explore P21472 
Go to UniProtKB:  P21472
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 13
MoleculeChainsSequence LengthOrganismDetailsImage
30S ribosomal protein uS13M [auth AM]121Bacillus subtilis subsp. subtilis str. 168Mutation(s): 0 
Gene Names: rpsMBSU01410
Find proteins for P20282 (Bacillus subtilis (strain 168))
Explore P20282 
Go to UniProtKB:  P20282
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 14
MoleculeChainsSequence LengthOrganismDetailsImage
30S ribosomal protein uS14N [auth AN]61Bacillus subtilis subsp. subtilis str. 168Mutation(s): 0 
Gene Names: rpsN1rpsNrpsNArpsZBSU01290
Find proteins for P12878 (Bacillus subtilis (strain 168))
Explore P12878 
Go to UniProtKB:  P12878
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 15
MoleculeChainsSequence LengthOrganismDetailsImage
30S ribosomal protein uS15O [auth AO]89Bacillus subtilis subsp. subtilis str. 168Mutation(s): 0 
Gene Names: rpsOBSU16680
Find proteins for P21473 (Bacillus subtilis (strain 168))
Explore P21473 
Go to UniProtKB:  P21473
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 16
MoleculeChainsSequence LengthOrganismDetailsImage
30S ribosomal protein bS16P [auth AP]90Bacillus subtilis subsp. subtilis str. 168Mutation(s): 0 
Gene Names: rpsPBSU15990
Find proteins for P21474 (Bacillus subtilis (strain 168))
Explore P21474 
Go to UniProtKB:  P21474
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 17
MoleculeChainsSequence LengthOrganismDetailsImage
30S ribosomal protein uS17Q [auth AQ]87Bacillus subtilis subsp. subtilis str. 168Mutation(s): 0 
Gene Names: rpsQBSU01250
Find proteins for P12874 (Bacillus subtilis (strain 168))
Explore P12874 
Go to UniProtKB:  P12874
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 18
MoleculeChainsSequence LengthOrganismDetailsImage
30S ribosomal protein bS18R [auth AR]79Bacillus subtilis subsp. subtilis str. 168Mutation(s): 0 
Gene Names: rpsRBSU40890
Find proteins for P21475 (Bacillus subtilis (strain 168))
Explore P21475 
Go to UniProtKB:  P21475
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 19
MoleculeChainsSequence LengthOrganismDetailsImage
30S ribosomal protein uS19S [auth AS]92Bacillus subtilis subsp. subtilis str. 168Mutation(s): 0 
Gene Names: rpsSBSU01200
Find proteins for P21476 (Bacillus subtilis (strain 168))
Explore P21476 
Go to UniProtKB:  P21476
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 20
MoleculeChainsSequence LengthOrganismDetailsImage
30S ribosomal protein bS20T [auth AT]88Bacillus subtilis subsp. subtilis str. 168Mutation(s): 0 
Gene Names: rpsTyqeOBSU25550
Find proteins for P21477 (Bacillus subtilis (strain 168))
Explore P21477 
Go to UniProtKB:  P21477
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 23
MoleculeChainsSequence LengthOrganismDetailsImage
MifMW [auth AZ]95Bacillus subtilis subsp. subtilis str. 168Mutation(s): 0 
Gene Names: mifMyqzJBSU23880
Find proteins for Q7WY64 (Bacillus subtilis (strain 168))
Explore Q7WY64 
Go to UniProtKB:  Q7WY64
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 24
MoleculeChainsSequence LengthOrganismDetailsImage
50S ribosomal protein bL28X [auth B0]62Bacillus subtilis subsp. subtilis str. 168Mutation(s): 0 
Gene Names: rpmByloTBSU15820
Find proteins for P37807 (Bacillus subtilis (strain 168))
Explore P37807 
Go to UniProtKB:  P37807
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 25
MoleculeChainsSequence LengthOrganismDetailsImage
50S ribosomal protein uL29Y [auth B1]66Bacillus subtilis subsp. subtilis str. 168Mutation(s): 0 
Gene Names: rpmCBSU01240
Find proteins for P12873 (Bacillus subtilis (strain 168))
Explore P12873 
Go to UniProtKB:  P12873
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 26
MoleculeChainsSequence LengthOrganismDetailsImage
50S ribosomal protein uL30Z [auth B2]59Bacillus subtilis subsp. subtilis str. 168Mutation(s): 0 
Gene Names: rpmDBSU01340
Find proteins for P19947 (Bacillus subtilis (strain 168))
Explore P19947 
Go to UniProtKB:  P19947
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 27
MoleculeChainsSequence LengthOrganismDetailsImage
50S ribosomal protein bL31AA [auth B3]66Bacillus subtilis subsp. subtilis str. 168Mutation(s): 0 
Gene Names: rpmEBSU37070
Find proteins for Q03223 (Bacillus subtilis (strain 168))
Explore Q03223 
Go to UniProtKB:  Q03223
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 28
MoleculeChainsSequence LengthOrganismDetailsImage
50S ribosomal protein bL32BA [auth B4]59Bacillus subtilis subsp. subtilis str. 168Mutation(s): 0 
Gene Names: rpmFBSU15080
Find proteins for O34687 (Bacillus subtilis (strain 168))
Explore O34687 
Go to UniProtKB:  O34687
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 29
MoleculeChainsSequence LengthOrganismDetailsImage
50S ribosomal protein bL33CA [auth B5]49Bacillus subtilis subsp. subtilis str. 168Mutation(s): 0 
Gene Names: rpmGArpmG1BSU24900
Find proteins for P56849 (Bacillus subtilis (strain 168))
Explore P56849 
Go to UniProtKB:  P56849
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 30
MoleculeChainsSequence LengthOrganismDetailsImage
50S ribosomal protein bL34DA [auth B6]44Bacillus subtilis subsp. subtilis str. 168Mutation(s): 0 
Gene Names: rpmHBSU41060
Find proteins for P05647 (Bacillus subtilis (strain 168))
Explore P05647 
Go to UniProtKB:  P05647
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 31
MoleculeChainsSequence LengthOrganismDetailsImage
50S ribosomal protein bL35EA [auth B7]66Bacillus subtilis subsp. subtilis str. 168Mutation(s): 0 
Gene Names: rpmIBSU28860
Find proteins for P55874 (Bacillus subtilis (strain 168))
Explore P55874 
Go to UniProtKB:  P55874
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 32
MoleculeChainsSequence LengthOrganismDetailsImage
50S ribosomal protein bL36FA [auth B8]37Bacillus subtilis subsp. subtilis str. 168Mutation(s): 0 
Gene Names: rpmJBSU01400
Find proteins for P20278 (Bacillus subtilis (strain 168))
Explore P20278 
Go to UniProtKB:  P20278
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 35
MoleculeChainsSequence LengthOrganismDetailsImage
50S ribosomal protein uL2IA [auth BD]277Bacillus subtilis subsp. subtilis str. 168Mutation(s): 0 
Gene Names: rplBBSU01190
Find proteins for P42919 (Bacillus subtilis (strain 168))
Explore P42919 
Go to UniProtKB:  P42919
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 36
MoleculeChainsSequence LengthOrganismDetailsImage
50S ribosomal protein uL3JA [auth BE]209Bacillus subtilis subsp. subtilis str. 168Mutation(s): 0 
Gene Names: rplCBSU01160
Find proteins for P42920 (Bacillus subtilis (strain 168))
Explore P42920 
Go to UniProtKB:  P42920
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 37
MoleculeChainsSequence LengthOrganismDetailsImage
50S ribosomal protein uL4KA [auth BF]207Bacillus subtilis subsp. subtilis str. 168Mutation(s): 0 
Gene Names: rplDBSU01170
Find proteins for P42921 (Bacillus subtilis (strain 168))
Explore P42921 
Go to UniProtKB:  P42921
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 38
MoleculeChainsSequence LengthOrganismDetailsImage
50S ribosomal protein uL5LA [auth BG]179Bacillus subtilis subsp. subtilis str. 168Mutation(s): 0 
Gene Names: rplEBSU01280
Find proteins for P12877 (Bacillus subtilis (strain 168))
Explore P12877 
Go to UniProtKB:  P12877
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 39
MoleculeChainsSequence LengthOrganismDetailsImage
50S ribosomal protein uL6MA [auth BH]179Bacillus subtilis subsp. subtilis str. 168Mutation(s): 0 
Gene Names: rplFBSU01310
Find proteins for P46898 (Bacillus subtilis (strain 168))
Explore P46898 
Go to UniProtKB:  P46898
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 40
MoleculeChainsSequence LengthOrganismDetailsImage
50S ribosomal protein uL10NA [auth BJ]166Bacillus subtilis subsp. subtilis str. 168Mutation(s): 0 
Gene Names: rplJBSU01040
Find proteins for P42923 (Bacillus subtilis (strain 168))
Explore P42923 
Go to UniProtKB:  P42923
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 41
MoleculeChainsSequence LengthOrganismDetailsImage
50S ribosomal protein uL11OA [auth BK]141Bacillus subtilis subsp. subtilis str. 168Mutation(s): 0 
Gene Names: rplKrelCtsp6BSU01020
Find proteins for Q06796 (Bacillus subtilis (strain 168))
Explore Q06796 
Go to UniProtKB:  Q06796
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 42
MoleculeChainsSequence LengthOrganismDetailsImage
50S ribosomal protein uL13PA [auth BM]145Bacillus subtilis subsp. subtilis str. 168Mutation(s): 0 
Gene Names: rplMBSU01490
Find proteins for P70974 (Bacillus subtilis (strain 168))
Explore P70974 
Go to UniProtKB:  P70974
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 43
MoleculeChainsSequence LengthOrganismDetailsImage
50S ribosomal protein uL14QA [auth BN]122Bacillus subtilis subsp. subtilis str. 168Mutation(s): 0 
Gene Names: rplNBSU01260
Find proteins for P12875 (Bacillus subtilis (strain 168))
Explore P12875 
Go to UniProtKB:  P12875
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 44
MoleculeChainsSequence LengthOrganismDetailsImage
50S ribosomal protein uL15RA [auth BO]146Bacillus subtilis subsp. subtilis str. 168Mutation(s): 0 
Gene Names: rplOBSU01350
Find proteins for P19946 (Bacillus subtilis (strain 168))
Explore P19946 
Go to UniProtKB:  P19946
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 45
MoleculeChainsSequence LengthOrganismDetailsImage
50S ribosomal protein uL16SA [auth BP]144Bacillus subtilis subsp. subtilis str. 168Mutation(s): 0 
Gene Names: rplPBSU01230
Find proteins for P14577 (Bacillus subtilis (strain 168))
Explore P14577 
Go to UniProtKB:  P14577
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 46
MoleculeChainsSequence LengthOrganismDetailsImage
50S ribosomal protein bL17TA [auth BQ]120Bacillus subtilis subsp. subtilis str. 168Mutation(s): 0 
Gene Names: rplQBSU01440
Find proteins for P20277 (Bacillus subtilis (strain 168))
Explore P20277 
Go to UniProtKB:  P20277
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 47
MoleculeChainsSequence LengthOrganismDetailsImage
50S ribosomal protein uL18UA [auth BR]120Bacillus subtilis subsp. subtilis str. 168Mutation(s): 0 
Gene Names: rplRBSU01320
Find proteins for P46899 (Bacillus subtilis (strain 168))
Explore P46899 
Go to UniProtKB:  P46899
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 48
MoleculeChainsSequence LengthOrganismDetailsImage
50S ribosomal protein bL19VA [auth BS]115Bacillus subtilis subsp. subtilis str. 168Mutation(s): 0 
Gene Names: rplSBSU16040
Find proteins for O31742 (Bacillus subtilis (strain 168))
Explore O31742 
Go to UniProtKB:  O31742
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 49
MoleculeChainsSequence LengthOrganismDetailsImage
50S ribosomal protein bL20WA [auth BT]119Bacillus subtilis subsp. subtilis str. 168Mutation(s): 0 
Gene Names: rplTBSU28850
Find proteins for P55873 (Bacillus subtilis (strain 168))
Explore P55873 
Go to UniProtKB:  P55873
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 50
MoleculeChainsSequence LengthOrganismDetailsImage
50S ribosomal protein bL21XA [auth BU]102Bacillus subtilis subsp. subtilis str. 168Mutation(s): 0 
Gene Names: rplUBSU27960
Find proteins for P26908 (Bacillus subtilis (strain 168))
Explore P26908 
Go to UniProtKB:  P26908
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 51
MoleculeChainsSequence LengthOrganismDetailsImage
50S ribosomal protein uL22YA [auth BV]113Bacillus subtilis subsp. subtilis str. 168Mutation(s): 0 
Gene Names: rplVBSU01210
Find proteins for P42060 (Bacillus subtilis (strain 168))
Explore P42060 
Go to UniProtKB:  P42060
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 52
MoleculeChainsSequence LengthOrganismDetailsImage
50S ribosomal protein uL23ZA [auth BW]95Bacillus subtilis subsp. subtilis str. 168Mutation(s): 0 
Gene Names: rplWBSU01180
Find proteins for P42924 (Bacillus subtilis (strain 168))
Explore P42924 
Go to UniProtKB:  P42924
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 53
MoleculeChainsSequence LengthOrganismDetailsImage
50S ribosomal protein uL24AB [auth BX]103Bacillus subtilis subsp. subtilis str. 168Mutation(s): 0 
Gene Names: rplXBSU01270
Find proteins for P0CI78 (Bacillus subtilis (strain 168))
Explore P0CI78 
Go to UniProtKB:  P0CI78
Protein Feature View
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 54
MoleculeChainsSequence LengthOrganismDetailsImage
50S ribosomal protein bL27BB [auth BZ]94Bacillus subtilis subsp. subtilis str. 168Mutation(s): 0 
Gene Names: rpmABSU27940
Find proteins for P05657 (Bacillus subtilis (strain 168))
Explore P05657 
Go to UniProtKB:  P05657
Protein Feature View
Expand
  • Reference Sequence
Find similar nucleic acids by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsLengthOrganismImage
16S ribosomal RNAA [auth AA]1555Bacillus subtilis subsp. subtilis str. 168
Find similar nucleic acids by:  (by identity cutoff)  |  Structure
Entity ID: 21
MoleculeChainsLengthOrganismImage
tRNA-AspU [auth AX]77Bacillus subtilis subsp. subtilis str. 168
  • Find similar nucleic acids by:  Sequence   |   Structure
  • Entity ID: 22
    MoleculeChainsLengthOrganismImage
    mRNAV [auth AY]19Bacillus subtilis subsp. subtilis str. 168
    Find similar nucleic acids by:  (by identity cutoff)  |  Structure
    Entity ID: 33
    MoleculeChainsLengthOrganismImage
    23S ribosomal RNAGA [auth BA]2928Bacillus subtilis subsp. subtilis str. 168
    Find similar nucleic acids by:  (by identity cutoff)  |  Structure
    Entity ID: 34
    MoleculeChainsLengthOrganismImage
    5S ribosomal RNAHA [auth BB]119Bacillus subtilis subsp. subtilis str. 168
    Experimental Data & Validation

    Experimental Data

    • Method: ELECTRON MICROSCOPY
    • Resolution: 3.90 Å
    • Aggregation State: PARTICLE 
    • Reconstruction Method: SINGLE PARTICLE 

    Structure Validation

    View Full Validation Report



    Entry History 

    Deposition Data

    Revision History  (Full details and data files)

    • Version 1.0: 2015-04-29
      Type: Initial release
    • Version 1.1: 2015-05-06
      Changes: Database references
    • Version 1.2: 2018-07-18
      Changes: Data collection