3IVB

Structures of SPOP-Substrate Complexes: Insights into Architectures of BTB-Cul3 Ubiquitin Ligases: SPOPMATH-MacroH2ASBCpep1


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.75 Å
  • R-Value Free: 0.247 
  • R-Value Work: 0.218 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Speckle-type POZ protein
A
145Homo sapiensMutation(s): 0 
Gene Names: SPOP
Find proteins for O43791 (Homo sapiens)
Go to Gene View: SPOP
Go to UniProtKB:  O43791
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
Core histone macro-H2A.1
M
15Homo sapiensMutation(s): 0 
Gene Names: H2AFY (MACROH2A1)
Find proteins for O75367 (Homo sapiens)
Go to Gene View: H2AFY
Go to UniProtKB:  O75367
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
ZN
Query on ZN

Download SDF File 
Download CCD File 
A
ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
 Ligand Interaction
CL
Query on CL

Download SDF File 
Download CCD File 
A
CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.75 Å
  • R-Value Free: 0.247 
  • R-Value Work: 0.218 
  • Space Group: P 65 2 2
Unit Cell:
Length (Å)Angle (°)
a = 44.021α = 90.00
b = 44.021β = 90.00
c = 266.840γ = 120.00
Software Package:
Software NamePurpose
PHASERphasing
REFMACrefinement
HKL-2000data scaling
HKL-2000data collection
HKL-2000data reduction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2009-10-20
    Type: Initial release
  • Version 1.1: 2011-07-13
    Type: Version format compliance