3IG4

Structure of a putative aminopeptidase P from Bacillus anthracis


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.89 Å
  • R-Value Free: 0.226 
  • R-Value Work: 0.198 
  • R-Value Observed: 0.199 

wwPDB Validation   3D Report Full Report


This is version 1.3 of the entry. See complete history


Literature

Structure of a putative aminopeptidase P from Bacillus anthracis

Anderson, S.M.Wawrzak, Z.Skarina, T.Onopriyenko, O.Kwon, K.Anderson, W.F.Savchenko, A.Center for Structural Genomics of Infectious Diseases (CSGID)

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
Xaa-pro aminopeptidaseA, B, C, D, E, F427Bacillus anthracisMutation(s): 0 
Gene Names: BAS1763BA_1901GBAA1901GBAA_1901F0720_10055FYB77_24390GRA88_11395GRA94_23490GRA98_10795
UniProt
Find proteins for A0A6L8PS06 (Bacillus anthracis)
Explore A0A6L8PS06 
Go to UniProtKB:  A0A6L8PS06
Protein Feature View
Expand
  • Reference Sequence
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
SO4
Query on SO4

Download Ideal Coordinates CCD File 
AA [auth C] , AB [auth F] , BA [auth C] , BB [auth F] , CA [auth C] , CB [auth F] , DA [auth C] , DB [auth F] , 
AA [auth C], AB [auth F], BA [auth C], BB [auth F], CA [auth C], CB [auth F], DA [auth C], DB [auth F], EA [auth C], FA [auth C], I [auth A], IA [auth D], J [auth A], JA [auth D], K [auth A], KA [auth D], L [auth A], LA [auth D], M [auth A], MA [auth D], N [auth A], NA [auth D], O [auth A], OA [auth D], P [auth A], RA [auth E], S [auth B], SA [auth E], T [auth B], TA [auth E], U [auth B], UA [auth E], V [auth B], VA [auth E], W [auth B], X [auth B], YA [auth F], ZA [auth F]
SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
 Ligand Interaction
MN
Query on MN

Download Ideal Coordinates CCD File 
G [auth A] , GA [auth D] , H [auth A] , HA [auth D] , PA [auth E] , Q [auth B] , QA [auth E] , R [auth B] , 
G [auth A], GA [auth D], H [auth A], HA [auth D], PA [auth E], Q [auth B], QA [auth E], R [auth B], WA [auth F], XA [auth F], Y [auth C], Z [auth C]
MANGANESE (II) ION
Mn
WAEMQWOKJMHJLA-UHFFFAOYSA-N
 Ligand Interaction
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
MSE
Query on MSE
A, B, C, D, E, FL-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

Unit Cell:
Length ( Å )Angle ( ˚ )
a = 180.88α = 90
b = 180.88β = 90
c = 254.78γ = 90
Software Package:
Software NamePurpose
DENZOdata reduction
SCALEPACKdata scaling
REFMACrefinement
PDB_EXTRACTdata extraction
BLU-MAXdata collection
HKL-2000data reduction
SHARPphasing

Structure Validation

View Full Validation Report




Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2009-08-04
    Type: Initial release
  • Version 1.1: 2011-07-13
    Changes: Advisory, Version format compliance
  • Version 1.2: 2011-12-14
    Changes: Database references, Structure summary
  • Version 1.3: 2017-11-01
    Changes: Refinement description