3IEF

Crystal structure of tRNA guanine-n1-methyltransferase from Bartonella henselae using MPCS.


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.50 Å
  • R-Value Free: 0.225 
  • R-Value Work: 0.195 
  • R-Value Observed: 0.196 

wwPDB Validation   3D Report Full Report


This is version 1.2 of the entry. See complete history


Literature

Crystal structure of tRNA guanine-n1-methyltransferase from Bartonella henselae using MPCS.

Edwards, T.E.Stahl, G.Gerdts, C.J.Staker, B.L.Accelerated Technologies Center for Gene to 3D Structure (ATCG3D)Seattle Structural Genomics Center for Infectious Disease (SSGCID)

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
tRNA (guanine-N(1)-)-methyltransferaseAB233Bartonella henselaeMutation(s): 0 
Gene Names: trmDBH15820
EC: 2.1.1.31 (PDB Primary Data), 2.1.1.228 (UniProt)
Find proteins for Q6G1R9 (Bartonella henselae (strain ATCC 49882 / DSM 28221 / Houston 1))
Explore Q6G1R9 
Go to UniProtKB:  Q6G1R9
Protein Feature View
Expand
  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.50 Å
  • R-Value Free: 0.225 
  • R-Value Work: 0.195 
  • R-Value Observed: 0.196 
  • Space Group: P 21 21 21
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 56.017α = 90
b = 84.467β = 90
c = 97.192γ = 90
Software Package:
Software NamePurpose
DENZOdata reduction
SCALEPACKdata scaling
PHASERphasing
REFMACrefinement
PDB_EXTRACTdata extraction
HKL-2000data reduction
HKL-2000data scaling

Structure Validation

View Full Validation Report



Entry History 

Revision History 

  • Version 1.0: 2009-08-11
    Type: Initial release
  • Version 1.1: 2011-07-13
    Changes: Version format compliance
  • Version 1.2: 2017-11-01
    Changes: Refinement description