3I3C

Crystal Structural of CBX5 Chromo Shadow Domain


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.48 Å
  • R-Value Free: 0.303 
  • R-Value Work: 0.266 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

Crystal Structural of CBX5 Chromo Shadow Domain

Li, Z.Li, Y.Amaya, M.F.Edwards, A.M.Arrowsmith, C.H.Weigelt, J.Bountra, C.Bochkarev, A.Min, J.Ouyang, H.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Chromobox protein homolog 5
A, B, C, D
75Homo sapiensMutation(s): 0 
Gene Names: CBX5 (HP1A)
Find proteins for P45973 (Homo sapiens)
Go to Gene View: CBX5
Go to UniProtKB:  P45973
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
NA
Query on NA

Download SDF File 
Download CCD File 
A, B
SODIUM ION
Na
FKNQFGJONOIPTF-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.48 Å
  • R-Value Free: 0.303 
  • R-Value Work: 0.266 
  • Space Group: P 21 21 2
Unit Cell:
Length (Å)Angle (°)
a = 81.660α = 90.00
b = 126.587β = 90.00
c = 31.399γ = 90.00
Software Package:
Software NamePurpose
SCALEPACKdata scaling
PDB_EXTRACTdata extraction
DENZOdata reduction
REFMACrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2009-08-18
    Type: Initial release
  • Version 1.1: 2011-07-13
    Type: Advisory, Refinement description, Version format compliance
  • Version 1.2: 2017-11-01
    Type: Refinement description