3I2V | pdb_00003i2v

Crystal structure of human MOCS3 rhodanese-like domain

• PDB DOI: https://doi.org/10.2210/pdb3I2V/pdb

• Classification: TRANSFERASE
• Organism(s): Homo sapiens
• Expression System: Escherichia coli
• Mutation(s): No 


• Deposited: 2009-06-29 Released: 2009-07-21 
• Deposition Author(s): Bacik, J.P., Walker, J.R., Lopez, L., Li, Y., Weigelt, J., Bountra, C., Arrowsmith, C.H., Edwards, A.M., Bochkarev, A., Dhe-Paganon, S., Structural Genomics Consortium (SGC)

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 1.25 Å
• R-Value Free: 
  0.204 (Depositor), 0.199 (DCC) 
• R-Value Work: 
  0.159 (Depositor), 0.156 (DCC) 
• R-Value Observed: 
  0.161 (Depositor) 

Literature

Crystal structure of the human MOCS3 rhodanese-like domain

Bacik, J.P., Walker, J.R., Lopez, L., Li, Y., Weigelt, J., Bountra, C., Arrowsmith, C.H., Edwards, A.M., Bochkarev, A., Dhe-Paganon, S.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors and generated by PISA (software)

Macromolecule Content 

• Total Structure Weight: 14.22 kDa 
• Atom Count: 1,169 
• Modeled Residue Count: 124 
• Deposited Residue Count: 127 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Adenylyltransferase and sulfurtransferase MOCS3	A	127	Homo sapiens	Mutation(s): 0  Gene Names: MOCS3, MOCS3_HUMAN, UBA4 EC: 2.7.7 (PDB Primary Data), 2.8.1 (PDB Primary Data), 2.7.7.80 (UniProt), 2.8.1.11 (UniProt)
UniProt & NIH Common Fund Data Resources
Find proteins for O95396 (Homo sapiens) Explore O95396  Go to UniProtKB:  O95396
PHAROS:  O95396 GTEx:  ENSG00000124217

Small Molecules

Modified Residues  1 Unique
ID	Chains	Type	Formula	2D Diagram	Parent
MSE	A	L-PEPTIDE LINKING	C5 H11 N O2 Se		MET

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 1.25 Å
• R-Value Free:  0.204 (Depositor), 0.199 (DCC) 
• R-Value Work:  0.159 (Depositor), 0.156 (DCC) 
• R-Value Observed: 0.161 (Depositor) 

Space Group: P 1 2₁ 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 36.817	α = 90
b = 31.911	β = 110.16
c = 50.64	γ = 90

Software Package:

Software Name	Purpose
HKL-2000	data collection
PHENIX	model building
PHENIX	refinement
HKL-2000	data reduction
HKL-2000	data scaling
PHENIX	phasing

Structure Validation

Entry History 

Deposition Data

• Released Date: 2009-07-21 
Deposition Author(s): Bacik, J.P., Walker, J.R., Lopez, L., Li, Y., Weigelt, J., Bountra, C., Arrowsmith, C.H., Edwards, A.M., Bochkarev, A., Dhe-Paganon, S., Structural Genomics Consortium (SGC)

Revision History  

• Version 1.0: 2009-07-21
  Type: Initial release
  
• Version 1.1: 2011-07-13
  Changes: Version format compliance
• Version 1.2: 2024-10-09
  Changes: Data collection, Database references, Derived calculations, Structure summary