3HNP | pdb_00003hnp

Crystal Structure of an Oxidoreductase from Bacillus cereus. Northeast Structural Genomics Consortium target id BcR251

PDB DOI: https://doi.org/10.2210/pdb3HNP/pdb

Classification: OXIDOREDUCTASE
Organism(s): Bacillus cereus ATCC 14579
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2009-05-31 Released: 2009-06-30
Deposition Author(s): Seetharaman, J., Su, M., Sahdev, S., Janjua, H., Xiao, R., Ciccosanti, C., Foote, E.L., Acton, T.B., Rost, B., Montelione, G.T., Tong, L., Hunt, J.F., Northeast Structural Genomics Consortium (NESG)

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.60 Å
R-Value Free:
0.282 (Depositor), 0.288 (DCC)
R-Value Work:
0.239 (Depositor), 0.245 (DCC)
R-Value Observed:
0.239 (Depositor)

wwPDB Validation 3D Report Full Report

Validation slider image for 3HNP

This is version 1.2 of the entry. See complete history.

Literature

Crystal Structure of an Oxidoreductase from Bacillus cereus. Northeast Structural Genomics Consortium target id BcR251

Seetharaman, J., Su, M., Sahdev, S., Janjua, H., Xiao, R., Ciccosanti, C., Foote, E.L., Acton, T.B., Rost, B., Montelione, G.T., Tong, L., Hunt, J.F.

To be published.

Macromolecule Content

Total Structure Weight: 239.74 kDa
Atom Count: 15,535
Modeled Residue Count: 1,975
Deposited Residue Count: 2,118
Unique protein chains: 1

Macromolecules

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Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Oxidoreductase	A, B, C, D, E A, B, C, D, E, F	353	Bacillus cereus ATCC 14579	Mutation(s): 0 Gene Names: BC_3406 EC: 1.1.1
UniProt
Find proteins for Q81AZ1 (Bacillus cereus (strain ATCC 14579 / DSM 31 / CCUG 7414 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NCTC 2599 / NRRL B-3711)) Explore Q81AZ1 Go to UniProtKB: Q81AZ1
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q81AZ1
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 2.60 Å
R-Value Free: 0.282 (Depositor), 0.288 (DCC)
R-Value Work: 0.239 (Depositor), 0.245 (DCC)
R-Value Observed: 0.239 (Depositor)

Space Group: P 1 2₁ 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 91.661	α = 90
b = 149.51	β = 92.13
c = 95.767	γ = 90

Software Package:

Software Name	Purpose
ADSC	data collection
SOLVE	phasing
CNS	refinement
HKL-2000	data reduction
HKL-2000	data scaling

Structure Validation

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Entry History

Deposition Data

Released Date: 2009-06-30

Deposition Author(s):

Seetharaman, J.

Montelione, G.T.

Northeast Structural Genomics Consortium (NESG)

Revision History (Full details and data files)

Version 1.0: 2009-06-30
Type: Initial release
Version 1.1: 2011-07-13
Changes: Version format compliance
Version 1.2: 2024-02-21
Changes: Data collection, Database references

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.