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Download EndnoteCrystal structure of NTF2-superfamily protein with unknown function (NP_977240.1) from BACILLUS CEREUS ATCC 10987 at 1.25 A resolution
Joint Center for Structural Genomics (JCSG)To be published.
3GRD
Crystal structure of NTF2-superfamily protein with unknown function (NP_977240.1) from BACILLUS CEREUS ATCC 10987 at 1.25 A resolution
- DOI: 10.2210/pdb3GRD/pdb
- Classification: structural genomics unknown function
- Organism(s): Bacillus cereus (strain ATCC 10987 / NRS 248)
- Expression System: Escherichia coli
- Deposited: 2009-03-25 Released: 2009-04-07
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.25 Å
- R-Value Free: 0.167
- R-Value Work: 0.133
wwPDB Validation 3D Report Full Report
This is version 1.2 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by: Sequence | Structure
Entity ID: 1 | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details |
| uncharacterized NTF2-superfamily protein | A, B | 134 | Bacillus cereus (strain ATCC 10987 / NRS 248) | Mutation(s): 0 |
Find proteins for Q73CZ7 (Bacillus cereus (strain ATCC 10987 / NRS 248)) Go to UniProtKB: Q73CZ7 | ||||
Small Molecules
| Ligands 2 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| NA Query on NA | A, B | SODIUM ION Na FKNQFGJONOIPTF-UHFFFAOYSA-N |  | Ligand Interaction | |
| ACT Query on ACT | A, B | ACETATE ION C2 H3 O2 QTBSBXVTEAMEQO-UHFFFAOYSA-M |  | Ligand Interaction | |
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| MSE Query on MSE | A, B | L-PEPTIDE LINKING | C5 H11 N O2 Se |  | MET |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.25 Å
- R-Value Free: 0.167
- R-Value Work: 0.133
- Space Group: P 21 21 21
- Diffraction Data DOI:
10.18430/M33GRD Protein Diffraction
Unit Cell:
| Length (Å) | Angle (°) |
|---|---|
| a = 41.090 | α = 90.00 |
| b = 47.140 | β = 90.00 |
| c = 151.790 | γ = 90.00 |
| Software Name | Purpose |
|---|---|
| XDS | data reduction |
| MolProbity | model building |
| SHELX | phasing |
| autoSHARP | phasing |
| SHELXD | phasing |
| XSCALE | data scaling |
| PDB_EXTRACT | data extraction |
| REFMAC | refinement |
| PHENIX | refinement |
Entry History
Deposition Data
- Deposited Date: 2009-03-25
- Released Date: 2009-04-07
- Deposition Author(s): Joint Center for Structural Genomics (JCSG)
Revision History
- Version 1.0: 2009-04-07
Type: Initial release - Version 1.1: 2011-07-13
Type: Version format compliance - Version 1.2: 2017-10-25
Type: Author supporting evidence, Refinement description
