3GO9

Predicted insulinase family protease from Yersinia pestis


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.62 Å
  • R-Value Free: 0.203 
  • R-Value Work: 0.166 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

X-ray crystal structure of predicted insulinase family protease from Yersinia pestis.

Osipiuk, J.Maltseva, N.Onopriyenko, O.Peterson, S.Anderson, W.F.Joachimiak, A.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
insulinase family protease
A
492Yersinia pestisGene Names: pqqL
Find proteins for Q7CG15 (Yersinia pestis)
Go to UniProtKB:  Q7CG15
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
ZN
Query on ZN

Download SDF File 
Download CCD File 
A
ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
 Ligand Interaction
PEG
Query on PEG

Download SDF File 
Download CCD File 
A
DI(HYDROXYETHYL)ETHER
C4 H10 O3
MTHSVFCYNBDYFN-UHFFFAOYSA-N
 Ligand Interaction
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
MSE
Query on MSE
A
L-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

Unit Cell:
Length (Å)Angle (°)
a = 42.890α = 90.00
b = 80.230β = 99.34
c = 66.620γ = 90.00
Software Package:
Software NamePurpose
DENZOdata reduction
REFMACrefinement
RESOLVEphasing
HKL-3000data reduction
HKL-3000phasing
PDB_EXTRACTdata extraction
HKL-3000data scaling
SOLVEphasing
MLPHAREphasing
SCALEPACKdata scaling
SHELXDphasing
SBC-Collectdata collection
DMphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2009-04-07
    Type: Initial release
  • Version 1.1: 2011-07-13
    Type: Advisory, Version format compliance
  • Version 1.2: 2017-11-01
    Type: Refinement description