3GNJ

The crystal structure of a thioredoxin-related protein from Desulfitobacterium hafniense DCB


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.99 Å
  • R-Value Free: 0.266 
  • R-Value Work: 0.196 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

The crystal structure of a thioredoxin-related protein from Desulfitobacterium hafniense DCB

Tan, K.Volkart, L.Gu, M.Kinney, J.N.Babnigg, G.Kerfeld, C.Joachimiak, A.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Thioredoxin domain protein
A, B, C, D
111Desulfitobacterium hafniense (strain DCB-2 / DSM 10664)Mutation(s): 0 
Find proteins for B8G0E7 (Desulfitobacterium hafniense (strain DCB-2 / DSM 10664))
Go to UniProtKB:  B8G0E7
Small Molecules
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
MSE
Query on MSE
A, B, C, D
L-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.99 Å
  • R-Value Free: 0.266 
  • R-Value Work: 0.196 
  • Space Group: P 1 21 1
Unit Cell:
Length (Å)Angle (°)
a = 43.167α = 90.00
b = 66.341β = 105.67
c = 70.163γ = 90.00
Software Package:
Software NamePurpose
DMmodel building
SBC-Collectdata collection
HKL-3000data scaling
MLPHAREphasing
SHELXDphasing
HKL-3000phasing
REFMACrefinement
DMphasing
HKL-3000data reduction
ARPmodel building
WARPmodel building

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2009-05-12
    Type: Initial release
  • Version 1.1: 2011-07-13
    Type: Advisory, Version format compliance