3GN7

PARP complexed with A861696


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.271 
  • R-Value Work: 0.194 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

PARP complexed with A861696

Park, C.H.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Poly [ADP-ribose] polymerase 1
A
350Homo sapiensMutation(s): 1 
Gene Names: PARP1 (ADPRT, PPOL)
EC: 2.4.2.30
Find proteins for P09874 (Homo sapiens)
Go to Gene View: PARP1
Go to UniProtKB:  P09874
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
3GN
Query on 3GN

Download SDF File 
Download CCD File 
A
2-[(2S)-2-methylpyrrolidin-2-yl]-1H-benzimidazole-7-carboxamide
C13 H16 N4 O
JNAHVYVRKWKWKQ-ZDUSSCGKSA-N
 Ligand Interaction
External Ligand Annotations 
IDBinding Affinity (Sequence Identity %)
3GNKi: 4 - 5 nM (99) BINDINGDB
3GNKi: 5 nM PDBBIND
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.271 
  • R-Value Work: 0.194 
  • Space Group: P 3 2 1
Unit Cell:
Length (Å)Angle (°)
a = 94.349α = 90.00
b = 94.349β = 90.00
c = 68.204γ = 120.00
Software Package:
Software NamePurpose
HKL-2000data reduction
CNSphasing
CNXrefinement
CNSrefinement
HKL-2000data scaling
HKL-2000data collection
BUSTER-TNTrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

  • Deposited Date: 2009-03-16 
  • Released Date: 2010-03-16 
  • Deposition Author(s): Park, C.H.

Revision History 

  • Version 1.0: 2010-03-16
    Type: Initial release
  • Version 1.1: 2011-07-13
    Type: Version format compliance
  • Version 1.2: 2019-07-24
    Type: Data collection, Refinement description