3GGE

Crystal structure of the PDZ domain of PDZ domain-containing protein GIPC2


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.6 Å
  • R-Value Free: 0.265 
  • R-Value Work: 0.223 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

Crystal structure of the PDZ domain of PDZ domain-containing protein GIPC2

Chaikuad, A.Hozjan, V.Yue, W.Cooper, C.Elkins, J.Pike, A.C.W.Roos, A.K.Filippakopoulos, P.von Delft, F.Arrowsmith, C.H.Edwards, A.M.Weigelt, J.Bountra, C.Oppermann, U.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
PDZ domain-containing protein GIPC2
A, B, C
95Homo sapiensMutation(s): 0 
Gene Names: GIPC2
Find proteins for Q8TF65 (Homo sapiens)
Go to Gene View: GIPC2
Go to UniProtKB:  Q8TF65
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
SO4
Query on SO4

Download SDF File 
Download CCD File 
B
SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
 Ligand Interaction
GOL
Query on GOL

Download SDF File 
Download CCD File 
B
GLYCEROL
GLYCERIN; PROPANE-1,2,3-TRIOL
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.6 Å
  • R-Value Free: 0.265 
  • R-Value Work: 0.223 
  • Space Group: P 41 2 2
Unit Cell:
Length (Å)Angle (°)
a = 83.510α = 90.00
b = 83.510β = 90.00
c = 160.310γ = 90.00
Software Package:
Software NamePurpose
PHASERphasing
REFMACrefinement
SCALAdata scaling
MOSFLMdata reduction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Revision History 

  • Version 1.0: 2009-03-24
    Type: Initial release
  • Version 1.1: 2011-07-13
    Type: Advisory, Version format compliance
  • Version 1.2: 2018-01-31
    Type: Database references, Structure summary