3GD7

Crystal structure of human NBD2 complexed with N6-Phenylethyl-ATP (P-ATP)


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.70 Å
  • R-Value Free: 0.308 
  • R-Value Work: 0.247 

wwPDB Validation   3D Report Full Report


This is version 1.3 of the entry. See complete history


Literature

Crystal structure of human NBD2 complexed with N6-Phenylethyl-ATP (P-ATP)

Atwell, S.Antonysamy, S.Guggino, W.B.Conners, K.Emtage, S.Gheyi, T.Hunt, J.F.Lewis, H.A.Lu, F.Sauder, J.M.Weber, P.C.Wetmore, D.Zhao, X.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
Fusion complex of Cystic fibrosis transmembrane conductance regulator, residues 1193-1427 and Maltose/maltodextrin import ATP-binding protein malK, residues 219-371ABCD390Homo sapiensEscherichia coli K-12
This entity is chimeric
Mutation(s): 7 
Gene Names: CFTRmalK
EC: 5.6.1.6 (UniProt), 7.5.2.1 (UniProt)
Find proteins for P13569 (Homo sapiens)
Explore P13569 
Go to UniProtKB:  P13569
NIH Common Fund Data Resources
PHAROS  P13569
Find proteins for P68187 (Escherichia coli (strain K12))
Explore P68187 
Go to UniProtKB:  P68187
Protein Feature View
Expand
  • Reference Sequence
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
B44
Query on B44

Download CCD File 
A, B, C, D
N-(2-phenylethyl)adenosine 5'-(tetrahydrogen triphosphate)
C18 H24 N5 O13 P3
PSPRNONTFBJUDQ-SCFUHWHPSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.70 Å
  • R-Value Free: 0.308 
  • R-Value Work: 0.247 
  • Space Group: P 21 21 2
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 137.837α = 90
b = 173.725β = 90
c = 82.574γ = 90
Software Package:
Software NamePurpose
REFMACrefinement
PDB_EXTRACTdata extraction
ADSCdata collection
d*TREKdata reduction
SCALAdata scaling
PHASERphasing

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2010-03-02
    Type: Initial release
  • Version 1.1: 2011-07-13
    Changes: Version format compliance
  • Version 1.2: 2017-08-16
    Changes: Refinement description, Source and taxonomy
  • Version 1.3: 2018-11-21
    Changes: Data collection, Structure summary