3G2R

Crystal structure of d(CACGCG).d(CGCGTG) cocrystallized with MnCl2


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.15 Å
  • R-Value Free: 0.270 
  • R-Value Work: 0.269 
  • R-Value Observed: 0.269 

wwPDB Validation   3D Report Full Report


This is version 1.1 of the entry. See complete history


Literature

Crystal studies of d(CACGCG).d(CGCGTG) grown with various counter ions

Venkadesh, S.Mandal, P.K.Kannan, R.Gautham, N.

To be published.

Macromolecules
  • Find similar nucleic acids by:  Sequence   |   Structure
  • Entity ID: 1
    MoleculeChainsLengthOrganismImage
    5'-D(*CP*GP*TP*GP*CP*G)-3'A6N/A
    Small Molecules
    Ligands 2 Unique
    IDChainsName / Formula / InChI Key2D Diagram3D Interactions
    DCM
    Query on DCM

    Download Ideal Coordinates CCD File 
    B [auth A]2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE
    C9 H14 N3 O7 P
    NCMVOABPESMRCP-SHYZEUOFSA-N
     Ligand Interaction
    MN
    Query on MN

    Download Ideal Coordinates CCD File 
    C [auth A]MANGANESE (II) ION
    Mn
    WAEMQWOKJMHJLA-UHFFFAOYSA-N
     Ligand Interaction
    Experimental Data & Validation

    Experimental Data

    • Method: X-RAY DIFFRACTION
    • Resolution: 2.15 Å
    • R-Value Free: 0.270 
    • R-Value Work: 0.269 
    • R-Value Observed: 0.269 
    • Space Group: C 2 2 21
    Unit Cell:
    Length ( Å )Angle ( ˚ )
    a = 17.878α = 90
    b = 30.97β = 90
    c = 43.405γ = 90
    Software Package:
    Software NamePurpose
    MAR345dtbdata collection
    AMoREphasing
    REFMACrefinement
    AUTOMARdata reduction
    SCALEPACKdata scaling

    Structure Validation

    View Full Validation Report



    Entry History 

    Deposition Data

    Revision History  (Full details and data files)

    • Version 1.0: 2009-03-03
      Type: Initial release
    • Version 1.1: 2011-07-13
      Changes: Version format compliance