Crystal structure of a putative conjugative transposon recombinase from Clostridium difficile
Bagaria, A., Burley, S.K., Swaminathan, S.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Putative conjugative transposon recombinase | 169 | Clostridioides difficile 630 | Mutation(s): 0  Gene Names: CD3370 | ||
UniProt | |||||
Find proteins for Q180L7 (Clostridioides difficile (strain 630)) Explore Q180L7  Go to UniProtKB:  Q180L7 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q180L7 | ||||
Sequence AnnotationsExpand | |||||
|
Ligands 2 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
GOL Query on GOL | C [auth A] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N | |||
NA Query on NA | D [auth B] | SODIUM ION Na FKNQFGJONOIPTF-UHFFFAOYSA-N |
Modified Residues 1 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Type | Formula | 2D Diagram | Parent |
MSE Query on MSE | A, B | L-PEPTIDE LINKING | C5 H11 N O2 Se | MET |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 64.47 | α = 90 |
b = 71.318 | β = 90 |
c = 94.176 | γ = 90 |
Software Name | Purpose |
---|---|
CBASS | data collection |
SHELXD | phasing |
SHARP | phasing |
REFMAC | refinement |
HKL-2000 | data reduction |
HKL-2000 | data scaling |