3FQ5

Crystal Structure of d(CACGCG).d(CGCGTG) with 10mM MnCl2


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.80 Å
  • R-Value Free: 0.202 
  • R-Value Work: 0.165 
  • R-Value Observed: 0.167 

wwPDB Validation   3D Report Full Report


This is version 1.2 of the entry. See complete history


Literature

Crystal Structure of d(CACGCG).d(CGCGTG) with 10mM MnCl2

Venkadesh, S.Mandal, P.K.Gautham, N.

To be published.

Macromolecules
  • Find similar nucleic acids by:  Sequence   |   Structure
  • Entity ID: 1
    MoleculeChainsLengthOrganismImage
    5'-D(*CP*AP*CP*GP*CP*G)-3'A, C6synthetic construct
    Protein Feature View
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    • Reference Sequence
    • Find similar nucleic acids by:  Sequence   |   Structure
    • Entity ID: 2
      MoleculeChainsLengthOrganismImage
      5'-D(*CP*GP*CP*GP*TP*G)-3'B, D6synthetic construct
      Protein Feature View
      Expand
      • Reference Sequence
      Small Molecules
      Ligands 1 Unique
      IDChainsName / Formula / InChI Key2D Diagram3D Interactions
      MN
      Query on MN

      Download Ideal Coordinates CCD File 
      E [auth A], F [auth A]MANGANESE (II) ION
      Mn
      WAEMQWOKJMHJLA-UHFFFAOYSA-N
       Ligand Interaction
      Experimental Data & Validation

      Experimental Data

      • Method: X-RAY DIFFRACTION
      • Resolution: 2.80 Å
      • R-Value Free: 0.202 
      • R-Value Work: 0.165 
      • R-Value Observed: 0.167 
      • Space Group: P 1 21 1
      Unit Cell:
      Length ( Å )Angle ( ˚ )
      a = 24.612α = 90
      b = 31.257β = 103.64
      c = 31.962γ = 90
      Software Package:
      Software NamePurpose
      MAR345dtbdata collection
      PHASERphasing
      REFMACrefinement
      AUTOMARdata reduction
      SCALEPACKdata scaling

      Structure Validation

      View Full Validation Report




      Entry History 

      Deposition Data

      Revision History  (Full details and data files)

      • Version 1.0: 2009-02-10
        Type: Initial release
      • Version 1.1: 2011-07-13
        Changes: Version format compliance
      • Version 1.2: 2019-08-28
        Changes: Data collection, Source and taxonomy