3FPU

The crystallographic structure of the Complex between Evasin-1 and CCL3


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.76 Å
  • R-Value Free: 0.285 
  • R-Value Work: 0.231 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

Structural basis of chemokine sequestration by a tick chemokine binding protein: the crystal structure of the complex between Evasin-1 and CCL3

Dias, J.M.Losberger, C.Deruaz, M.Power, C.A.Proudfoot, A.E.I.Shaw, J.P.

(2009) Plos One 4: --

  • DOI: 10.1371/journal.pone.0008514
  • Primary Citation of Related Structures:  

  • PubMed Abstract: 
  • Chemokines are a subset of cytokines responsible for controlling the cellular migration of inflammatory cells through interaction with seven transmembrane G protein-coupled receptors. The blocking of a chemokine-receptor interaction results in a redu ...

    Chemokines are a subset of cytokines responsible for controlling the cellular migration of inflammatory cells through interaction with seven transmembrane G protein-coupled receptors. The blocking of a chemokine-receptor interaction results in a reduced inflammatory response, and represents a possible anti-inflammatory strategy, a strategy that is already employed by some virus and parasites. Anti-chemokine activity has been described in the extracts of tick salivary glands, and we have recently described the cloning and characterization of such chemokine binding proteins from the salivary glands, which we have named Evasins.


    Related Citations: 
    • Molecular cloning and characterization of a highly selective chemokine-binding protein from the tick Rhipicephalus sanguineus.
      Frauenschuh, A.,Power, C.A.,Deruaz, M.,Ferreira, B.R.,Silva, J.S.,Teixeira, M.M.,Dias, J.M.,Martin, T.,Wells, T.N.C.,Proudfoot, A.E.I.
      (2007) J.Biol.Chem. 282: 27250
    • Ticks produce highly selective chemokine binding proteins with antiinflammatory activity
      Deruaz, M.,Frauenschuh, A.,Alessandri, A.L.,Dias, J.M.,Coelho, F.M.,Russo, R.C.,Ferreira, B.R.,Graham, G.J.,Shaw, J.P.,Wells, T.N.C.,Teixeira, M.M.,Power, C.A.,Proudfoot, A.E.I.
      (2008) J.Exp.Med. 205: 2019


    Organizational Affiliation

    Merck Serono Geneva Research Center, Merck Serono S.A., Geneva, Switzerland.




Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Evasin-1
A
100Rhipicephalus sanguineusMutation(s): 0 
Find proteins for P0C8E7 (Rhipicephalus sanguineus)
Go to UniProtKB:  P0C8E7
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
C-C motif chemokine 3
B
70Homo sapiensMutation(s): 1 
Gene Names: CCL3 (G0S19-1, MIP1A, SCYA3)
Find proteins for P10147 (Homo sapiens)
Go to Gene View: CCL3
Go to UniProtKB:  P10147
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
NI
Query on NI

Download SDF File 
Download CCD File 
A
NICKEL (II) ION
Ni
VEQPNABPJHWNSG-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.76 Å
  • R-Value Free: 0.285 
  • R-Value Work: 0.231 
  • Space Group: P 43 3 2
Unit Cell:
Length (Å)Angle (°)
a = 104.384α = 90.00
b = 104.384β = 90.00
c = 104.384γ = 90.00
Software Package:
Software NamePurpose
HKL-2000data collection
AMoREphasing
SCALEPACKdata scaling
REFMACrefinement
DENZOdata reduction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

  • Deposited Date: 2009-01-06 
  • Released Date: 2010-01-12 
  • Deposition Author(s): Shaw, J.P., Dias, J.M.

Revision History 

  • Version 1.0: 2010-01-12
    Type: Initial release
  • Version 1.1: 2011-07-13
    Type: Version format compliance
  • Version 1.2: 2013-10-16
    Type: Derived calculations