3FLV

The crystal structure of human acyl-CoenzymeA binding domain containing 5


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.259 
  • R-Value Work: 0.212 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

The crystal structure of human acyl-Coenzyme A binding domain containing 5

Ugochukwu, E.Roos, A.Yue, W.W.Shafqat, N.Salah, E.Savitsky, P.Muniz, J.R.C.von Delft, F.Oppermann, U.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Acyl-CoA-binding domain-containing protein 5
A, B
119Homo sapiensMutation(s): 0 
Gene Names: ACBD5 (KIAA1996)
Find proteins for Q5T8D3 (Homo sapiens)
Go to Gene View: ACBD5
Go to UniProtKB:  Q5T8D3
Small Molecules
Ligands 3 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
STE
Query on STE

Download SDF File 
Download CCD File 
A
STEARIC ACID
C18 H36 O2
QIQXTHQIDYTFRH-UHFFFAOYSA-N
 Ligand Interaction
COA
Query on COA

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Download CCD File 
A, B
COENZYME A
C21 H36 N7 O16 P3 S
RGJOEKWQDUBAIZ-IBOSZNHHSA-N
 Ligand Interaction
UNX
Query on UNX

Download SDF File 
Download CCD File 
B
UNKNOWN ATOM OR ION
X
*
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.259 
  • R-Value Work: 0.212 
  • Space Group: C 1 2 1
Unit Cell:
Length (Å)Angle (°)
a = 136.751α = 90.00
b = 34.064β = 102.16
c = 54.877γ = 90.00
Software Package:
Software NamePurpose
REFMACrefinement
MAR345data collection
SCALAdata scaling
PHASERphasing
MOSFLMdata reduction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Revision History 

  • Version 1.0: 2009-02-03
    Type: Initial release
  • Version 1.1: 2011-07-13
    Type: Advisory, Version format compliance
  • Version 1.2: 2017-11-01
    Type: Refinement description