Crystal Structure of 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF from Yersinia pestis
Kim, Y., Maltseva, N., Stam, J., Anderson, W.F., Joachimiak, A.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | 165 | Yersinia pestis CO92 | Mutation(s): 0  Gene Names: ispF, y0829, YPO3360, YP_0327 EC: 4.6.1.12 | ![]() | |
UniProt | |||||
Find proteins for Q8ZBP7 (Yersinia pestis) Explore Q8ZBP7  Go to UniProtKB:  Q8ZBP7 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q8ZBP7 | ||||
Sequence AnnotationsExpand | |||||
|
Modified Residues 1 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Type | Formula | 2D Diagram | Parent |
MSE Query on MSE | A | L-PEPTIDE LINKING | C5 H11 N O2 Se | MET |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 146.64 | α = 90 |
b = 146.64 | β = 90 |
c = 146.64 | γ = 90 |
Software Name | Purpose |
---|---|
SBC-Collect | data collection |
HKL-3000 | data collection |
HKL-3000 | phasing |
MLPHARE | phasing |
DM | model building |
SHELXD | phasing |
RESOLVE | model building |
Coot | model building |
REFMAC | refinement |
HKL-3000 | data reduction |
HKL-3000 | data scaling |
DM | phasing |
RESOLVE | phasing |