3F6M

Crystal Structure of 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF from Yersinia pestis


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.96 Å
  • R-Value Free: 0.203 
  • R-Value Work: 0.194 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

Crystal Structure of 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF from Yersinia pestis

Kim, Y.Maltseva, N.Stam, J.Anderson, W.F.Joachimiak, A.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
A
165Yersinia pestisGene Names: ispF
EC: 4.6.1.12
Find proteins for Q8ZBP7 (Yersinia pestis)
Go to UniProtKB:  Q8ZBP7
Small Molecules
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
MSE
Query on MSE
A
L-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

Unit Cell:
Length (Å)Angle (°)
a = 146.640α = 90.00
b = 146.640β = 90.00
c = 146.640γ = 90.00
Software Package:
Software NamePurpose
MLPHAREphasing
RESOLVEphasing
HKL-3000data scaling
SHELXDphasing
DMphasing
REFMACrefinement
SBC-Collectdata collection
DMmodel building
HKL-3000data collection
HKL-3000phasing
HKL-3000data reduction
RESOLVEmodel building
Cootmodel building

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2008-11-25
    Type: Initial release
  • Version 1.1: 2011-07-13
    Type: Version format compliance