3F42

Crystal structure of uncharacterized protein HP0035 from Helicobacter pylori


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.78 Å
  • R-Value Free: 0.220 
  • R-Value Work: 0.180 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

Crystal structure of uncharacterized protein HP0035 from Helicobacter pylori

Chang, C.Kudritska, M.Savchenko, A.Edwards, A.Joachimiak, A.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
protein HP0035
A, B
99Helicobacter pylori (strain ATCC 700392 / 26695)Mutation(s): 0 
Find proteins for O24876 (Helicobacter pylori (strain ATCC 700392 / 26695))
Go to UniProtKB:  O24876
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
EDO
Query on EDO

Download SDF File 
Download CCD File 
A, B
1,2-ETHANEDIOL
ETHYLENE GLYCOL
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
 Ligand Interaction
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
MSE
Query on MSE
A, B
L-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.78 Å
  • R-Value Free: 0.220 
  • R-Value Work: 0.180 
  • Space Group: C 2 2 21
Unit Cell:
Length (Å)Angle (°)
a = 87.129α = 90.00
b = 99.566β = 90.00
c = 45.196γ = 90.00
Software Package:
Software NamePurpose
SBC-Collectdata collection
RESOLVEphasing
MLPHAREphasing
RESOLVEmodel building
HKL-3000data scaling
SHELXDphasing
REFMACrefinement
HKL-3000data reduction
DMmodel building
DMphasing
Cootmodel building
HKL-3000phasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2008-11-18
    Type: Initial release
  • Version 1.1: 2011-07-13
    Type: Advisory, Refinement description, Version format compliance