3EJ0

Crystal structure of inorganic pyrophosphatase from burkholderia pseudomallei with bound N-(pyridin-3-ylmethyl) aniline, H32 crystal form


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.96 Å
  • R-Value Free: 0.252 
  • R-Value Work: 0.198 
  • R-Value Observed: 0.201 

wwPDB Validation 3D Report Full Report


This is version 1.3 of the entry. See complete history


Literature

The role of medical structural genomics in discovering new drugs for infectious diseases.

Van Voorhis, W.C.Hol, W.G.Myler, P.J.Stewart, L.J.

(2009) PLoS Comput Biol 5: e1000530-e1000530


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Inorganic pyrophosphatase
A
196Burkholderia pseudomallei 1710bMutation(s): 0 
Gene Names: ppaBURPS1710b_1237
EC: 3.6.1.1
Find proteins for Q3JUV5 (Burkholderia pseudomallei (strain 1710b))
Go to UniProtKB:  Q3JUV5
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
11X
Query on 11X

Download CCD File 
A
N-(pyridin-3-ylmethyl)aniline
C12 H12 N2
BJXLHKJBRORJJJ-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.96 Å
  • R-Value Free: 0.252 
  • R-Value Work: 0.198 
  • R-Value Observed: 0.201 
  • Space Group: H 3 2
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 68.698α = 90
b = 68.698β = 90
c = 191.156γ = 120
Software Package:
Software NamePurpose
HKL-2000data collection
MOLREPphasing
REFMACrefinement
HKL-2000data reduction
HKL-2000data scaling

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2008-09-30
    Type: Initial release
  • Version 1.1: 2011-07-13
    Changes: Version format compliance
  • Version 1.2: 2011-10-05
    Changes: Database references
  • Version 1.3: 2013-10-23
    Changes: Database references