3E95

Crystal Structure of the Plasmodium Falciparum ubiquitin conjugating enzyme complex, PfUBC13-PfUev1a


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.258 
  • R-Value Work: 0.248 

wwPDB Validation 3D Report Full Report


This is version 1.3 of the entry. See complete history

Literature

Crystal Structure of the Plasmodium Falciparum ubiquitin conjugating enzyme complex, PfUBC13-PfUev1a

Wernimont, A.K.Lam, A.Ali, A.Brokx, S.Lin, Y.H.Zhao, Y.Lew, J.Ravichandran, M.Wasney, G.Vedadi, M.Kozieradzki, I.Schapira, M.Bochkarev, A.Wilkstrom, M.Bountra, C.Arrowsmith, C.H.Edwards, A.M.Hui, R.Qiu, W.Brand, V.B.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Ubiquitin carrier protein
A, B
151Plasmodium falciparum (isolate 3D7)Mutation(s): 0 
EC: 6.3.2.19
Find proteins for Q8I3J4 (Plasmodium falciparum (isolate 3D7))
Go to UniProtKB:  Q8I3J4
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
Ubiquitin-conjugating enzyme E2
C
158Plasmodium falciparum (isolate 3D7)Mutation(s): 0 
EC: 6.3.2.19
Find proteins for O97241 (Plasmodium falciparum (isolate 3D7))
Go to UniProtKB:  O97241
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
UNX
Query on UNX

Download SDF File 
Download CCD File 
B
UNKNOWN ATOM OR ION
X
*
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.258 
  • R-Value Work: 0.248 
  • Space Group: P 65
Unit Cell:
Length (Å)Angle (°)
a = 154.856α = 90.00
b = 154.856β = 90.00
c = 81.360γ = 120.00
Software Package:
Software NamePurpose
REFMACrefinement
PDB_EXTRACTdata extraction
DENZOdata reduction
PHASERphasing
SCALEPACKdata scaling

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Revision History 

  • Version 1.0: 2008-09-30
    Type: Initial release
  • Version 1.1: 2011-07-13
    Type: Version format compliance
  • Version 1.2: 2013-09-18
    Type: Derived calculations
  • Version 1.3: 2017-10-25
    Type: Refinement description