3DN7

Cyclic nucleotide binding regulatory protein from Cytophaga hutchinsonii.


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.190 
  • R-Value Work: 0.172 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

X-ray crystal structure of cyclic nucleotide binding regulatory protein from Cytophaga hutchinsonii.

Osipiuk, J.Maltseva, N.Abdullah, J.Joachimiak, A.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Cyclic nucleotide binding regulatory protein
A, B
194Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)Mutation(s): 0 
Find proteins for Q11TQ6 (Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469))
Go to UniProtKB:  Q11TQ6
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
GOL
Query on GOL

Download SDF File 
Download CCD File 
B
GLYCEROL
GLYCERIN; PROPANE-1,2,3-TRIOL
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
 Ligand Interaction
EDO
Query on EDO

Download SDF File 
Download CCD File 
B
1,2-ETHANEDIOL
ETHYLENE GLYCOL
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
 Ligand Interaction
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
MSE
Query on MSE
A, B
L-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.190 
  • R-Value Work: 0.172 
  • Space Group: P 21 21 21
Unit Cell:
Length (Å)Angle (°)
a = 43.728α = 90.00
b = 83.519β = 90.00
c = 89.633γ = 90.00
Software Package:
Software NamePurpose
SBC-Collectdata collection
MLPHAREphasing
PDB_EXTRACTdata extraction
DENZOdata reduction
REFMACrefinement
HKL-3000data reduction
SCALEPACKdata scaling
SHELXDphasing
RESOLVEphasing
DMphasing
SOLVEphasing
HKL-3000phasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2008-08-26
    Type: Initial release
  • Version 1.1: 2011-07-13
    Type: Advisory, Source and taxonomy, Version format compliance
  • Version 1.2: 2017-10-25
    Type: Refinement description