3DMY

Crystal Structure of a predicated acyl-CoA synthetase from E.coli


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.07 Å
  • R-Value Free: 0.270 
  • R-Value Work: 0.237 
  • R-Value Observed: 0.237 

wwPDB Validation   3D Report Full Report


This is version 1.3 of the entry. See complete history


Literature

Crystal Structure of a predicted Acyl-CoA-synthetase from E.coli

Sugadev, R.Burley, S.K.Swaminathan, S.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Protein fdrA
A, B
480Escherichia coli K-12Mutation(s): 0 
Gene Names: fdrAylbDb0518JW0506
UniProt
Find proteins for Q47208 (Escherichia coli (strain K12))
Explore Q47208 
Go to UniProtKB:  Q47208
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ47208
Sequence Annotations
Expand
  • Reference Sequence
Small Molecules
Modified Residues  1 Unique
IDChains TypeFormula2D DiagramParent
MSE
Query on MSE
A, B
L-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.07 Å
  • R-Value Free: 0.270 
  • R-Value Work: 0.237 
  • R-Value Observed: 0.237 
  • Space Group: P 21 21 21
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 63.574α = 90
b = 107.776β = 90
c = 153.605γ = 90
Software Package:
Software NamePurpose
CNSrefinement
Blu-Icedata collection
HKL-2000data reduction
HKL-2000data scaling
SHELXphasing
SOLVEphasing
SHARPphasing
ARPmodel building
WARPmodel building

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2008-08-05
    Type: Initial release
  • Version 1.1: 2011-07-13
    Changes: Source and taxonomy, Version format compliance
  • Version 1.2: 2017-10-25
    Changes: Refinement description
  • Version 1.3: 2021-02-10
    Changes: Database references, Derived calculations, Structure summary