3DKO

Complex between the kinase domain of human ephrin type-a receptor 7 (epha7) and inhibitor alw-ii-49-7


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2 Å
  • R-Value Free: 0.232 
  • R-Value Work: 0.189 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

Kinase domain of human ephrin type-a receptor 7 (epha7) in complex with ALW-II-49-7

Walker, J.R.Syeda, F.Gray, N.Butler-Cole, C.Bountra, C.Wolkstrom, M.Arrowsmith, C.H.Edwards, A.M.Bochkarev, A.Dhe-Paganon, S.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Ephrin type-A receptor 7
A
318Homo sapiensMutation(s): 0 
Gene Names: EPHA7 (EHK3, HEK11)
EC: 2.7.10.1
Find proteins for Q15375 (Homo sapiens)
Go to Gene View: EPHA7
Go to UniProtKB:  Q15375
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
IHZ
Query on IHZ

Download SDF File 
Download CCD File 
A
5-[(2-methyl-5-{[3-(trifluoromethyl)phenyl]carbamoyl}phenyl)amino]pyridine-3-carboxamide
C21 H17 F3 N4 O2
SAAYRHKJHDIDPH-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2 Å
  • R-Value Free: 0.232 
  • R-Value Work: 0.189 
  • Space Group: P 65
Unit Cell:
Length (Å)Angle (°)
a = 52.658α = 90.00
b = 52.658β = 90.00
c = 217.059γ = 120.00
Software Package:
Software NamePurpose
SBC-Collectdata collection
PHASERphasing
HKL-2000data reduction
HKL-2000data scaling
REFMACrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2008-08-19
    Type: Initial release
  • Version 1.1: 2011-07-13
    Type: Version format compliance
  • Version 1.2: 2017-10-25
    Type: Refinement description